Protein

View in Explore
Genbank accession
YP_010090311.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,81
Seq2Symm
C1 confidence 1,000
C1 1,000
C3 0,002
C2 0,001
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MADQGILAQSKPAAATNTVLYSSPVDQSASTVLNVANDGTGSAYSVAVKDYNQRLTLDASTYLFHEGDTISSYFITTDAQMNSSSGFSAGQTITSSDNEVSFKFESFYTPEYTEIFVKTEDLRAITVESANGTFEVGDTLATGASPDDTTAIVYGVNTTTDSQILYVGPSTINGAGAEFADGNSVYTANASATISAGGIATAVNEFIFSTTTAGGVYNVHVNDALTVLVDRTYRFNISDATMAGRDFKLSDTVNGEWGPDNVIGGVSPDDGSEYTDGKTTNGTAGSAGAYVQYDLTVTGNALPSQLYFYDGGTGTASNADYGGSDRYLTVNYASTFDAFYIYSLYGTIVPNTTSFIVGGVTYTITAQTPGPYGYVRRYVGTALDVILGPNSSAYAGSEQFREVPKSNTAARSVATVSAIGVDETALEDQHYITVGATNSANNVDKITSLVVGPGETVVVNSTTQNNVFSLIGFEDSSSSYVVRVYGDDSGSGN
Physico‐chemical
properties
protein length:493 AA
molecular weight: 51538,14730 Da
isoelectric point:4,05003
aromaticity:0,10548
hydropathy:-0,13002

Taxonomy

Phage
Synechococcus phage S-H35 [NCBI] · taxon 1983572
Uroviricota Caudoviricetes Pantevenvirales Shandvirus Shandvirus sh35
Host
Synechococcus sp. [NCBI] · taxon 1131
cellular organisms Bacteria Bacillati Cyanobacteriota/Melainabacteria group Cyanobacteriota Cyanophyceae

Coding sequence (CDS)

Genbank protein accession
YP_010090311.1 [NCBI]
Genbank nucleotide accession
NC_055719.1 [NCBI]
CDS location
range 31270 -> 32751
strand -
CDS
ATGGCAGACCAAGGAATTTTAGCACAATCTAAACCAGCAGCAGCAACTAATACTGTGTTGTATAGTTCTCCTGTGGATCAATCCGCCAGCACCGTGTTAAACGTTGCGAATGATGGCACTGGATCTGCATATAGTGTTGCGGTTAAAGATTACAATCAAAGACTAACGCTGGATGCGTCCACTTATCTTTTCCATGAAGGGGATACAATTTCCAGTTATTTTATTACCACTGATGCTCAGATGAATAGTTCTTCTGGTTTCAGTGCAGGACAAACTATTACATCTTCAGATAATGAAGTTTCATTCAAATTTGAATCATTCTACACACCAGAATATACTGAGATCTTTGTAAAGACTGAAGATCTGAGAGCAATTACTGTAGAAAGTGCAAATGGCACCTTTGAAGTTGGTGACACTCTCGCCACTGGTGCATCTCCCGATGATACTACAGCAATAGTTTATGGTGTTAACACTACAACCGATTCTCAAATTCTCTACGTTGGTCCCTCAACAATTAACGGTGCTGGTGCTGAATTTGCTGATGGTAATAGTGTTTATACTGCCAATGCTTCTGCAACTATTTCTGCTGGTGGTATTGCAACAGCAGTAAATGAGTTTATTTTCTCCACAACAACTGCTGGTGGTGTATATAATGTCCATGTCAATGATGCTCTCACAGTTTTAGTAGATAGGACTTACAGATTTAATATTTCTGATGCAACGATGGCAGGCAGAGACTTCAAACTATCTGATACTGTTAATGGTGAATGGGGTCCTGATAATGTCATCGGTGGTGTATCTCCTGATGATGGATCTGAATATACTGATGGCAAAACAACTAATGGCACAGCAGGTAGTGCTGGTGCATATGTCCAATATGATTTAACTGTTACTGGTAATGCACTTCCATCTCAACTTTATTTCTATGATGGTGGCACAGGCACGGCAAGTAATGCAGATTATGGTGGATCTGATCGTTATCTGACTGTCAACTATGCATCTACTTTTGATGCTTTCTATATTTACAGTCTGTATGGCACGATCGTTCCTAATACAACCTCGTTTATTGTTGGTGGTGTTACTTACACTATTACAGCACAAACGCCTGGTCCTTATGGATACGTCCGTCGTTATGTTGGCACCGCGCTAGATGTTATTCTTGGTCCTAACTCTTCTGCATATGCAGGATCTGAGCAATTCCGTGAAGTGCCCAAGTCTAATACTGCAGCAAGATCAGTTGCTACTGTATCTGCAATCGGTGTAGATGAAACCGCACTAGAAGATCAGCATTATATCACAGTTGGTGCTACTAATTCTGCTAATAATGTAGATAAAATTACTTCCCTGGTTGTCGGACCTGGAGAAACTGTGGTTGTAAATTCAACTACACAAAATAATGTATTTAGTCTGATTGGTTTTGAAGATTCTTCTTCCTCTTATGTTGTAAGAGTATATGGAGATGACTCGGGCAGTGGTAATTGA

Genome Context

Tertiary structure

YP_010090311.1
ESMFold structure
Source ESMFold
pLDDT 44.0
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Isolation and Genetic Analysis of a Novel Cyanophage S-H35 from the Bohai Sea Xu,X. 2013-09-03 — GenBank