Protein

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Genbank accession
YP_010090311.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,81
Protein sequence
MADQGILAQSKPAAATNTVLYSSPVDQSASTVLNVANDGTGSAYSVAVKDYNQRLTLDASTYLFHEGDTISSYFITTDAQMNSSSGFSAGQTITSSDNEVSFKFESFYTPEYTEIFVKTEDLRAITVESANGTFEVGDTLATGASPDDTTAIVYGVNTTTDSQILYVGPSTINGAGAEFADGNSVYTANASATISAGGIATAVNEFIFSTTTAGGVYNVHVNDALTVLVDRTYRFNISDATMAGRDFKLSDTVNGEWGPDNVIGGVSPDDGSEYTDGKTTNGTAGSAGAYVQYDLTVTGNALPSQLYFYDGGTGTASNADYGGSDRYLTVNYASTFDAFYIYSLYGTIVPNTTSFIVGGVTYTITAQTPGPYGYVRRYVGTALDVILGPNSSAYAGSEQFREVPKSNTAARSVATVSAIGVDETALEDQHYITVGATNSANNVDKITSLVVGPGETVVVNSTTQNNVFSLIGFEDSSSSYVVRVYGDDSGSGN
Physico‐chemical
properties
protein length:493 AA
molecular weight: 51538,14730 Da
isoelectric point:4,05003
aromaticity:0,10548
hydropathy:-0,13002

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-H35
[NCBI] 		1983572 Uroviricota > Caudoviricetes > Pantevenvirales > Shandvirus > Shandvirus sh35
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010090311.1 [NCBI]
Genbank nucleotide accession
NC_055719.1 [NCBI]
CDS location
range 31270 -> 32751
strand -
CDS
ATGGCAGACCAAGGAATTTTAGCACAATCTAAACCAGCAGCAGCAACTAATACTGTGTTGTATAGTTCTCCTGTGGATCAATCCGCCAGCACCGTGTTAAACGTTGCGAATGATGGCACTGGATCTGCATATAGTGTTGCGGTTAAAGATTACAATCAAAGACTAACGCTGGATGCGTCCACTTATCTTTTCCATGAAGGGGATACAATTTCCAGTTATTTTATTACCACTGATGCTCAGATGAATAGTTCTTCTGGTTTCAGTGCAGGACAAACTATTACATCTTCAGATAATGAAGTTTCATTCAAATTTGAATCATTCTACACACCAGAATATACTGAGATCTTTGTAAAGACTGAAGATCTGAGAGCAATTACTGTAGAAAGTGCAAATGGCACCTTTGAAGTTGGTGACACTCTCGCCACTGGTGCATCTCCCGATGATACTACAGCAATAGTTTATGGTGTTAACACTACAACCGATTCTCAAATTCTCTACGTTGGTCCCTCAACAATTAACGGTGCTGGTGCTGAATTTGCTGATGGTAATAGTGTTTATACTGCCAATGCTTCTGCAACTATTTCTGCTGGTGGTATTGCAACAGCAGTAAATGAGTTTATTTTCTCCACAACAACTGCTGGTGGTGTATATAATGTCCATGTCAATGATGCTCTCACAGTTTTAGTAGATAGGACTTACAGATTTAATATTTCTGATGCAACGATGGCAGGCAGAGACTTCAAACTATCTGATACTGTTAATGGTGAATGGGGTCCTGATAATGTCATCGGTGGTGTATCTCCTGATGATGGATCTGAATATACTGATGGCAAAACAACTAATGGCACAGCAGGTAGTGCTGGTGCATATGTCCAATATGATTTAACTGTTACTGGTAATGCACTTCCATCTCAACTTTATTTCTATGATGGTGGCACAGGCACGGCAAGTAATGCAGATTATGGTGGATCTGATCGTTATCTGACTGTCAACTATGCATCTACTTTTGATGCTTTCTATATTTACAGTCTGTATGGCACGATCGTTCCTAATACAACCTCGTTTATTGTTGGTGGTGTTACTTACACTATTACAGCACAAACGCCTGGTCCTTATGGATACGTCCGTCGTTATGTTGGCACCGCGCTAGATGTTATTCTTGGTCCTAACTCTTCTGCATATGCAGGATCTGAGCAATTCCGTGAAGTGCCCAAGTCTAATACTGCAGCAAGATCAGTTGCTACTGTATCTGCAATCGGTGTAGATGAAACCGCACTAGAAGATCAGCATTATATCACAGTTGGTGCTACTAATTCTGCTAATAATGTAGATAAAATTACTTCCCTGGTTGTCGGACCTGGAGAAACTGTGGTTGTAAATTCAACTACACAAAATAATGTATTTAGTCTGATTGGTTTTGAAGATTCTTCTTCCTCTTATGTTGTAAGAGTATATGGAGATGACTCGGGCAGTGGTAATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
9f593e1233f237606091f2ff1e46a230808db2549ba3504aa619418dde7d3b30
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4396
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Genetic Analysis of a Novel Cyanophage S-H35 from the Bohai Sea Xu,X. 2013-09-03 — GenBank