Phage RBP Database

Genbank accession

XLG29430.1 [GenBank]

Protein name

hypothetical protein

RBP type

TF

Evidence RBPdetect

Probability 0,88

TF

Evidence RBPdetect2

Probability 0,72

Seq2Symm

C3 confidence 0,989

C3	0,989
C1	0,362
C2	0,000

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MDFTRRENYKLMSNLEKSVAINLENTAHYENISNLDITFRTGESDSSVLLFNIIKNNQPLLLSEENIKARIAIRGKGVMVVAPLEILDPFKGILKFQLPNDVIKRDGSYQAQVSVAELGNSDVVVVERTITFNVEKSLFSKIPSETKLHYIVEFQELEKTIMDRAKAMDEAIKNGEDYASLIEKAKEKGLSDIQIAKSSSIDELKQLANSRISDLENKAQAYSRTFDEQKRYMDEKHEAFKQSVNSGGLVTSGSTSNWQKAKITKDDGKIMQITGFDFNNPEQRIGDSTQFIYVSQAINYPRGVSTNGTVEYLVVTSDYKRMTYRPNGTNKVFVKRKEAGSWSEWSELAINDYNTPFETVQSAQSKANMAESNAKLYADDKFNKRYSVIFDGTANGVGSTLYLNESLDQFILLIFYGTFPGGDFTEFGSPFGGGKISLNPSNLPDGDGNGGGVYEFGLTKSSRTSLTISNDVYFDLGSQRGSGANANRGTINKIIGVRR

Physico‐chemical properties

protein length:	499 AA
molecular weight:	55550,57420 Da
isoelectric point:	5,75719
aromaticity:	0,09419
hydropathy:	-0,48677

Domain architecture

XLG29430.1

1 499 aa

ATT 17–163 · STR 290–349 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR018913
ATT

IPR018913 Coil cd19958

G3DSA:2.60.40.3350
ATT

G3DSA:2.60.40.3350 cd19958

XLG29430.1

1499 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0143
STR

DC_0143 DC_0151

XLG29430.1

1499 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR018913	ATT	DC_0557	17	163	InterPro cluster	BppU, N-terminal	Central	Medium	Text match	333 proteins / 333 hits
G3DSA:2.60.40.3350	ATT	G3DSA:2.60.40.3350	17	141	Merged direct domain	G3DSA:2.60.40.3350	N-terminal	Low	Positional only	41 proteins / 41 hits
Coil	Unmapped	-	205	225	Coils	Coil	-	-	-	-
cd19958	STR	DC_0464	290	349	InterPro cluster	cd19958	Central	Low	Positional only	1183 proteins / 1674 hits
cd19958	STR	DC_0464	297	349	InterPro cluster	cd19958	Central	Low	Positional only	1183 proteins / 1674 hits

Proteins with similar domain architecture

Phage

Staphylococcus phage YZUstau891 [NCBI] · taxon 3378227

Viruses unclassified bacterial viruses

Host

Staphylococcus aureus [NCBI] · taxon 1280

cellular organisms Bacteria Bacillati Bacillota Bacilli Bacillales

Genbank protein accession

XLG29430.1 [NCBI]

Genbank nucleotide accession

PQ567070 [NCBI]

CDS location

range 10775 -> 12274
strand +

CDS

ATGGACTTTACACGAAGGGAGAATTATAAGTTAATGAGTAATTTAGAGAAATCTGTAGCTATAAATTTAGAAAACACAGCGCATTATGAAAATATTTCAAATCTAGATATAACTTTTAGAACAGGAGAGAGTGATTCTTCTGTTCTTCTTTTTAATATCATTAAAAATAATCAACCGTTATTACTGAGTGAAGAAAATATCAAAGCACGAATAGCGATTCGAGGTAAAGGAGTAATGGTAGTTGCTCCACTAGAAATATTAGATCCATTTAAAGGTATTTTAAAATTTCAATTACCTAATGATGTAATTAAAAGAGATGGAAGTTATCAAGCTCAAGTTTCGGTTGCAGAATTAGGTAATTCAGACGTGGTAGTTGTAGAGAGAACTATCACATTTAACGTTGAAAAAAGTTTGTTTAGCAAGATTCCCTCTGAAACAAAACTACACTATATTGTTGAGTTTCAAGAATTAGAAAAAACTATTATGGATCGCGCGAAAGCAATGGACGAGGCTATAAAAAATGGTGAGGATTATGCGAGTCTGATTGAAAAAGCTAAAGAAAAAGGTCTATCAGATATTCAAATAGCAAAATCTTCAAGTATTGATGAATTAAAGCAACTTGCTAATAGCCGTATATCTGATTTGGAAAATAAAGCGCAAGCATATTCAAGAACATTCGATGAGCAAAAGCGATATATGGATGAGAAACATGAAGCCTTCAAGCAGTCAGTGAATAGTGGTGGTTTAGTCACAAGTGGTTCTACTTCAAATTGGCAAAAAGCTAAGATTACTAAAGATGATGGTAAGATAATGCAGATTACTGGATTTGATTTTAATAATCCAGAACAAAGAATAGGTGATTCAACCCAATTTATTTATGTTTCGCAAGCTATAAATTATCCAAGAGGTGTTAGTACTAACGGTACTGTCGAATATTTAGTAGTAACTTCAGACTACAAGCGTATGACTTATCGACCGAACGGTACAAATAAAGTGTTTGTTAAAAGAAAAGAAGCGGGTTCATGGTCTGAGTGGTCAGAATTAGCTATTAATGATTACAATACACCTTTTGAAACTGTTCAAAGTGCTCAATCAAAAGCTAATATGGCCGAAAGTAACGCTAAATTATACGCAGATGACAAGTTTAATAAAAGGTATTCGGTTATTTTTGATGGAACAGCAAATGGTGTGGGCTCTACATTGTACTTAAATGAGAGTTTAGACCAATTTATTTTATTAATTTTTTATGGGACTTTTCCAGGTGGTGACTTTACAGAGTTTGGCAGCCCTTTTGGAGGAGGAAAGATTTCATTGAATCCCTCAAATCTTCCAGATGGTGATGGAAACGGCGGAGGTGTTTATGAGTTTGGATTAACTAAATCTAGTCGTACATCTTTAACTATATCAAACGATGTCTATTTCGACTTAGGAAGTCAAAGAGGCTCTGGTGCGAACGCAAATAGAGGGACAATTAACAAAATTATAGGAGTGAGAAGATAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)