Protein

View in Explore
Genbank accession
YP_012026716.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,89
Protein sequence
MSFFAGKLNNKSILSLRRGSGGDTNQHINPDSQTIFHSDMPHVIITETHSTGLRLDQGAGDYYWSEMPSRITQLHNNDPNRVVLTEIEFSDGSRHMLSGMSMGVGAKAYGIINPQVMSQGGLKTQITASADLSLDVGYFNTGTSGTIPQKLRDGTGCQHIFGAFSGRRGFASSAMYLGGAALYKSAWDGSGYVVPDSGTLTIPSDYVRHPGARNFGFNAIYVRGRSCNRVLYGMEGPNYTTAGAVHGASSSGALNFMSNPSNPSAPKYSVGFARADPTNYAYWESMGDPNDAANGPIGIYSEHLGIYPSKITWYVTNLVYNGSGYSIDAGLFTGNDIKLSPTEFIIKGINVNNTSWKFINFIEKNFNVGNRADFRDVGCNLSMGAPSTGISGIATFGLPTTESNNAPSIKGGNVGGLNTNVVSIYNFLPSASWYVSSNPPKIGSNYGDVWSENLLPLRLLGGSGSTVLSGNIVFQGNGSVHVGTVGLDLNSSRNGAIVCTMEFLDDTWLSAGGIGCFNPTEMLSKGAEYGDSRFRMGGNTIDKKLHQILSLPAGEYVPFFTIKGTVVNACKLQAAGYTPTPYWVSGLPGSVGQTGYYTLTYYMRNDGNNNISIWLESSMSNIIGMKACLPNIKLIIQRLT
Physico‐chemical
properties
protein length:640 AA
molecular weight: 68524,12270 Da
isoelectric point:7,61412
aromaticity:0,10312
hydropathy:-0,18172

Domains

View on InterPro
Domain architecture
YP_012026716.1
1 640 aa
RBD 1–640
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YP_012026716.1
1 640 aa
Domain Start End Length (AA) Confidence
N-terminal 1 155 155 0,0619
Central domain 156 354 200 0,2773
C-terminal 355 640 285 0,9445
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Escherichia phage EC100 [NCBI] · taxon 2894397
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Escherichia coli [NCBI] · taxon 562
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Coding sequence (CDS)

Genbank protein accession
YP_012026716.1 [NCBI]
Genbank nucleotide accession
NC_105587.1 [NCBI]
CDS location
range 105528 -> 107450
strand -
CDS
ATGAGTTTTTTCGCTGGTAAGCTAAATAACAAATCTATACTCTCACTGCGAAGGGGTAGTGGTGGAGATACTAACCAACATATCAACCCTGATTCCCAAACCATCTTTCATTCAGATATGCCGCACGTAATTATAACGGAAACTCATTCTACTGGATTAAGATTGGATCAGGGCGCTGGTGACTATTACTGGTCTGAAATGCCTAGTAGAATTACACAGCTACATAATAATGACCCTAATAGGGTTGTATTAACAGAAATTGAGTTTTCTGATGGCTCTAGACATATGTTATCTGGCATGTCTATGGGGGTAGGTGCAAAAGCCTATGGTATTATAAATCCTCAGGTTATGTCTCAGGGTGGGTTAAAAACACAAATAACAGCTAGTGCCGATCTTTCACTTGATGTAGGCTATTTTAATACAGGTACTAGTGGCACTATACCACAAAAGTTAAGAGATGGTACTGGATGTCAGCATATATTTGGAGCCTTTAGTGGACGTAGAGGGTTTGCATCTAGTGCAATGTACTTAGGGGGTGCCGCTCTTTATAAGTCTGCCTGGGATGGTTCAGGATATGTAGTGCCGGATTCAGGAACTCTAACTATCCCTAGCGACTACGTTAGGCATCCCGGAGCTAGAAACTTTGGATTTAATGCCATATATGTTCGTGGAAGGTCTTGTAATAGAGTTCTTTACGGTATGGAGGGGCCTAACTATACTACTGCTGGAGCCGTGCACGGTGCTTCTAGTTCTGGGGCTCTTAACTTTATGTCTAATCCTAGCAATCCCTCGGCCCCTAAGTACTCTGTAGGTTTCGCACGTGCTGATCCCACTAACTATGCGTATTGGGAAAGTATGGGTGATCCGAATGATGCTGCTAATGGGCCCATAGGTATATATAGTGAGCACCTCGGTATTTATCCATCTAAAATTACCTGGTATGTTACTAACTTAGTGTATAATGGTTCAGGTTATAGTATTGATGCTGGATTATTCACAGGTAATGATATAAAATTAAGCCCCACTGAATTTATTATTAAAGGGATTAACGTTAATAATACATCTTGGAAGTTTATCAACTTTATAGAGAAAAACTTCAATGTCGGTAACAGGGCTGATTTTCGTGATGTTGGGTGTAACTTGAGTATGGGTGCCCCCTCTACTGGGATCTCTGGCATAGCAACATTTGGGCTGCCCACTACGGAAAGCAATAACGCACCAAGTATTAAAGGCGGTAACGTTGGTGGTTTAAATACTAATGTAGTTAGTATTTATAACTTTTTACCTTCAGCATCTTGGTATGTTTCTAGTAATCCTCCAAAAATAGGCAGCAATTATGGAGATGTTTGGAGTGAGAATCTTTTACCTTTAAGACTTCTAGGTGGTAGCGGAAGTACTGTACTATCTGGTAACATAGTATTTCAGGGTAATGGTTCCGTGCATGTTGGCACCGTGGGACTAGATCTTAATAGTAGTAGAAATGGCGCAATTGTATGTACTATGGAGTTCCTGGATGACACATGGTTGTCTGCAGGAGGTATTGGCTGCTTTAATCCTACGGAAATGCTATCTAAAGGCGCTGAATATGGCGATAGTAGGTTTAGAATGGGTGGCAATACTATCGATAAAAAACTTCACCAAATATTGTCCCTACCTGCAGGAGAATATGTACCATTTTTTACTATTAAAGGTACTGTAGTAAATGCTTGTAAATTACAGGCTGCTGGGTATACTCCAACTCCGTACTGGGTATCTGGGTTGCCAGGATCCGTAGGTCAAACGGGTTACTATACTCTAACATACTATATGAGAAATGATGGAAATAATAATATCTCTATTTGGTTAGAATCCTCTATGAGCAATATAATTGGCATGAAAGCATGCTTACCAAATATTAAACTTATAATTCAACGCCTTACCTAA

Genome Context

Tertiary structure

YP_012026716.1
ESMFold structure
Source ESMFold
pLDDT 26.1
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Complete genome sequences of 17 Escherichia coli bacteriophages isolated from wastewater, pond water, cow manure and bird feces Vitt,A.R., Ahern,S.J., Gambino,M., Holst Sorensen,M.C. and Brondsted,L. 2022-10-20 — GenBank