Protein

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Genbank accession
YP_012026716.1 [GenBank]
Protein name
receptor-binding protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TF
Evidence Phold
Probability 1,00
Protein sequence
MSFFAGKLNNKSILSLRRGSGGDTNQHINPDSQTIFHSDMPHVIITETHSTGLRLDQGAGDYYWSEMPSRITQLHNNDPNRVVLTEIEFSDGSRHMLSGMSMGVGAKAYGIINPQVMSQGGLKTQITASADLSLDVGYFNTGTSGTIPQKLRDGTGCQHIFGAFSGRRGFASSAMYLGGAALYKSAWDGSGYVVPDSGTLTIPSDYVRHPGARNFGFNAIYVRGRSCNRVLYGMEGPNYTTAGAVHGASSSGALNFMSNPSNPSAPKYSVGFARADPTNYAYWESMGDPNDAANGPIGIYSEHLGIYPSKITWYVTNLVYNGSGYSIDAGLFTGNDIKLSPTEFIIKGINVNNTSWKFINFIEKNFNVGNRADFRDVGCNLSMGAPSTGISGIATFGLPTTESNNAPSIKGGNVGGLNTNVVSIYNFLPSASWYVSSNPPKIGSNYGDVWSENLLPLRLLGGSGSTVLSGNIVFQGNGSVHVGTVGLDLNSSRNGAIVCTMEFLDDTWLSAGGIGCFNPTEMLSKGAEYGDSRFRMGGNTIDKKLHQILSLPAGEYVPFFTIKGTVVNACKLQAAGYTPTPYWVSGLPGSVGQTGYYTLTYYMRNDGNNNISIWLESSMSNIIGMKACLPNIKLIIQRLT
Physico‐chemical
properties
protein length:640 AA
molecular weight: 68524,12270 Da
isoelectric point:7,61412
aromaticity:0,10312
hydropathy:-0,18172

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage EC100
[NCBI] 		2894397 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_012026716.1 [NCBI]
Genbank nucleotide accession
NC_105587 [NCBI]
CDS location
range 105528 -> 107450
strand -
CDS
ATGAGTTTTTTCGCTGGTAAGCTAAATAACAAATCTATACTCTCACTGCGAAGGGGTAGTGGTGGAGATACTAACCAACATATCAACCCTGATTCCCAAACCATCTTTCATTCAGATATGCCGCACGTAATTATAACGGAAACTCATTCTACTGGATTAAGATTGGATCAGGGCGCTGGTGACTATTACTGGTCTGAAATGCCTAGTAGAATTACACAGCTACATAATAATGACCCTAATAGGGTTGTATTAACAGAAATTGAGTTTTCTGATGGCTCTAGACATATGTTATCTGGCATGTCTATGGGGGTAGGTGCAAAAGCCTATGGTATTATAAATCCTCAGGTTATGTCTCAGGGTGGGTTAAAAACACAAATAACAGCTAGTGCCGATCTTTCACTTGATGTAGGCTATTTTAATACAGGTACTAGTGGCACTATACCACAAAAGTTAAGAGATGGTACTGGATGTCAGCATATATTTGGAGCCTTTAGTGGACGTAGAGGGTTTGCATCTAGTGCAATGTACTTAGGGGGTGCCGCTCTTTATAAGTCTGCCTGGGATGGTTCAGGATATGTAGTGCCGGATTCAGGAACTCTAACTATCCCTAGCGACTACGTTAGGCATCCCGGAGCTAGAAACTTTGGATTTAATGCCATATATGTTCGTGGAAGGTCTTGTAATAGAGTTCTTTACGGTATGGAGGGGCCTAACTATACTACTGCTGGAGCCGTGCACGGTGCTTCTAGTTCTGGGGCTCTTAACTTTATGTCTAATCCTAGCAATCCCTCGGCCCCTAAGTACTCTGTAGGTTTCGCACGTGCTGATCCCACTAACTATGCGTATTGGGAAAGTATGGGTGATCCGAATGATGCTGCTAATGGGCCCATAGGTATATATAGTGAGCACCTCGGTATTTATCCATCTAAAATTACCTGGTATGTTACTAACTTAGTGTATAATGGTTCAGGTTATAGTATTGATGCTGGATTATTCACAGGTAATGATATAAAATTAAGCCCCACTGAATTTATTATTAAAGGGATTAACGTTAATAATACATCTTGGAAGTTTATCAACTTTATAGAGAAAAACTTCAATGTCGGTAACAGGGCTGATTTTCGTGATGTTGGGTGTAACTTGAGTATGGGTGCCCCCTCTACTGGGATCTCTGGCATAGCAACATTTGGGCTGCCCACTACGGAAAGCAATAACGCACCAAGTATTAAAGGCGGTAACGTTGGTGGTTTAAATACTAATGTAGTTAGTATTTATAACTTTTTACCTTCAGCATCTTGGTATGTTTCTAGTAATCCTCCAAAAATAGGCAGCAATTATGGAGATGTTTGGAGTGAGAATCTTTTACCTTTAAGACTTCTAGGTGGTAGCGGAAGTACTGTACTATCTGGTAACATAGTATTTCAGGGTAATGGTTCCGTGCATGTTGGCACCGTGGGACTAGATCTTAATAGTAGTAGAAATGGCGCAATTGTATGTACTATGGAGTTCCTGGATGACACATGGTTGTCTGCAGGAGGTATTGGCTGCTTTAATCCTACGGAAATGCTATCTAAAGGCGCTGAATATGGCGATAGTAGGTTTAGAATGGGTGGCAATACTATCGATAAAAAACTTCACCAAATATTGTCCCTACCTGCAGGAGAATATGTACCATTTTTTACTATTAAAGGTACTGTAGTAAATGCTTGTAAATTACAGGCTGCTGGGTATACTCCAACTCCGTACTGGGTATCTGGGTTGCCAGGATCCGTAGGTCAAACGGGTTACTATACTCTAACATACTATATGAGAAATGATGGAAATAATAATATCTCTATTTGGTTAGAATCCTCTATGAGCAATATAATTGGCATGAAAGCATGCTTACCAAATATTAAACTTATAATTCAACGCCTTACCTAA

Tertiary structure

PDB ID
431ff945980233d2b7759459eb8a6114bf622a1631d91a1160a081bb8dd41f12
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2606
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of 17 Escherichia coli bacteriophages isolated from wastewater, pond water, cow manure and bird feces Vitt,A.R., Ahern,S.J., Gambino,M., Holst Sorensen,M.C. and Brondsted,L. 2022-10-20 — GenBank