Protein

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UniProt accession
A0A219VHP1 [UniProt]
Protein name
Rhamnogalacturonase A/B/Epimerase-like pectate lyase domain-containing protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 1,00
Protein sequence
MVYDKHEWQDGELITSGKLNHMELGIQLADKQVSVKDYGAVGDGVADDTKSFINAFSENKGTKVIIPTGTYLITKQVSIFGDVEFQNAKVISTNNSQDYMFNVDGLDEINIIGFKYNNDNGRGAIKISNTKTVRLTSFDISGYSAETDYHKTDSALMLDNNTTIYLDDIKVHDHGFQYGAELEHLNRCISIQGDKTKTVIARGLQFSKANQGLVLSTPNGNVIVSDSSIDNTTDNSMYLLACLTFMATNVRFDDYYDESVIMGSGDYSFTNCWFSNVPNKVFGINNDTVGLSIIGCNIIQSDKHSGQIVSFRDVNYTLNTFIFESNRIVTAPDSTNNDLFYLGQINLFSIKNNTIKTFSISNGRNMFAFRNSDSNAPYTGVIKDNYVMPITKDVVIGTYYFARLYKEVGKVEISDNYISNGRMPMDNASVIYNGQKVFTSLGYVIDRTTRQSLYATTIPIKGRFNIGDVVYNTDPSNGVFAWVRVTTGLNNVSGVDWKTVSVN
Physico‐chemical
properties
protein length:503 AA
molecular weight: 55960,94330 Da
isoelectric point:5,17334
aromaticity:0,10934
hydropathy:-0,25308

Domains

View on InterPro
Domain architecture
A0A219VHP1
1 503 aa
STR 24–458 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
A0A219VHP1
1 503 aa
Domain Start End Length (AA) Confidence
N-terminal 1 49 49 0,9772
Central domain 50 430 382 0,9899
C-terminal 431 503 72 0,9357
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Leuconostoc phage CHB [NCBI] · taxon 1897737
No lineage information
Host No host information

Coding sequence (CDS)

No CDS data available.

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0044423 virion component Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0051701 biological process involved in interaction with host Biological Process IEA:UniProtKB-ARBA (UniProt)
GO:0019058 viral life cycle Biological Process IEA:UniProtKB-ARBA (UniProt)

Tertiary structure

A0A219VHP1
ESMFold structure
Source ESMFold
pLDDT 78.7
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
— — 28651078 PubMed