Phage RBP Database

Genbank accession

YP_007238012.1 [GenBank]

Protein name

tail protein

RBP type

TF

Evidence RBPdetect

Probability 0,90

TF

Evidence RBPdetect2

Probability 0,99

Protein sequence

MTTKFYALLTNQGAAKLANAAALGTKIQITEMAVGDGGGTLPTPDASQTRLVNEKRRAALNSLSVDAVNSSQIIAEQVIPENEGGFWIREIGLFDADGDMVAVANCAETYKPQLQEGSGRTQTIRMILIVNSTAAVTLKIDPSVVLATRKYVDDNVIEVRQYADSLMAKHLAAADPHSQYAPKVSPTFTGTPKAPTPAAGNNTTQLATTAFVTAALSALAGAAPATLDTLKELADALGNDPNFSTTVLNKLAGKMDIAKNGSDIADVAAFLKNLGLGEAAKRDVGTGENHIPDMNSFGSNLSGNGYMFFPGGLILQWGRIAVDYSIEHGSATVPGGSVHKYRGMGNFPISFPNALMCVTATSNDVPNTYIASIYPTSMQDFNWSFQSAQPYSTSSSGANTFCWIAIGC

Physico‐chemical properties

protein length:	408 AA
molecular weight:	42888,88250 Da
isoelectric point:	5,28849
aromaticity:	0,07353
hydropathy:	-0,04363

Domain architecture

YP_007238012.1

1 408 aa

ATT 1–150 · RBD 299–408

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR022225
ATT

IPR022225 G3DSA:2.60.40.3940

IPR051934
Unmapped

IPR051934 IPR054075

YP_007238012.1

1408 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1172
STR

DC_1172

YP_007238012.1

1408 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR022225	ATT	DC_0271	1	150	InterPro cluster	Phage tail fibre protein, N-terminal domain	Central	Medium	Text match	271 proteins / 271 hits
IPR051934	Unmapped	-	1	282	InterPro	Bacteriophage Tail Fiber Structural Protein	-	-	-	-
G3DSA:2.60.40.3940	RBD	G3DSA:2.60.40.3940	299	407	Merged direct domain	G3DSA:2.60.40.3940	C-terminal	Low	Positional only	77 proteins / 77 hits
IPR054075	RBD	DC_0717	309	408	InterPro cluster	Putative tail fiber protein gp53-like, C-terminal	C-terminal	Low	Positional only	174 proteins / 174 hits

Proteins with similar domain architecture

Phage

Erwinia phage ENT90 [NCBI] · taxon 947843

Uroviricota Caudoviricetes Peduoviridae Entnonagintavirus ENT90

Host

Erwinia amylovora [NCBI] · taxon 552

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Genbank protein accession

YP_007238012.1 [NCBI]

Genbank nucleotide accession

NC_019932 [NCBI]

CDS location

range 1021 -> 2247
strand -

CDS

ATGACAACAAAATTCTATGCCCTGCTGACGAATCAGGGCGCGGCCAAGCTCGCCAACGCAGCGGCGCTCGGCACCAAAATCCAGATTACCGAAATGGCCGTGGGTGACGGCGGCGGCACGTTACCAACGCCTGACGCTTCACAGACCAGGCTCGTTAATGAAAAGCGCCGCGCCGCGCTAAATTCGCTGAGCGTGGACGCGGTGAACAGCAGCCAGATTATTGCCGAGCAGGTCATTCCTGAAAATGAGGGCGGCTTCTGGATACGTGAAATCGGCCTGTTTGATGCCGACGGCGATATGGTGGCCGTGGCGAACTGTGCCGAAACCTACAAGCCGCAGCTACAGGAAGGCAGTGGACGCACCCAAACCATCCGCATGATTTTAATCGTGAACAGCACGGCTGCCGTGACGCTGAAAATTGACCCGTCGGTAGTGCTGGCAACGCGTAAATACGTGGATGATAACGTGATTGAGGTACGCCAGTACGCGGACAGCCTGATGGCGAAACATCTCGCTGCCGCCGATCCGCATTCGCAGTATGCGCCAAAGGTCAGCCCGACCTTTACCGGTACACCAAAAGCCCCGACGCCTGCAGCGGGCAACAACACTACGCAGCTGGCAACCACGGCATTTGTTACCGCTGCGCTTTCGGCGCTGGCCGGAGCGGCACCTGCCACGCTCGATACGCTGAAAGAGCTGGCCGACGCGCTGGGCAATGATCCGAATTTCTCGACCACGGTGCTGAACAAGCTGGCCGGGAAAATGGATATTGCGAAGAATGGCAGCGATATCGCTGACGTGGCGGCGTTTCTCAAAAATCTTGGTTTGGGCGAAGCAGCAAAACGGGATGTCGGAACAGGAGAAAATCACATCCCGGACATGAACAGCTTTGGGAGTAATTTATCCGGTAACGGTTATATGTTTTTCCCCGGTGGACTTATCCTGCAGTGGGGCAGGATTGCTGTGGATTATTCGATTGAGCATGGCTCTGCTACGGTGCCTGGAGGAAGCGTGCATAAATATAGGGGAATGGGGAATTTCCCTATTTCGTTTCCTAATGCATTAATGTGTGTTACAGCCACAAGTAATGATGTTCCGAATACATATATAGCCAGCATTTACCCGACCTCTATGCAGGATTTTAATTGGTCTTTTCAATCGGCCCAACCCTATTCAACCAGTAGCTCAGGTGCAAACACTTTTTGCTGGATCGCAATAGGTTGCTAA

Title	Authors	Date	PMID	Source
Genomic sequence of temperate phage ENT90 isolated from Erwinia amylovora	Lee,Y.-D. and Park,J.-H.	2011-02-12	—	GenBank

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Literature