Protein

View in Explore
Genbank accession
QOE32750.1 [GenBank]
Protein name
collar protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,84
Protein sequence
MAATLDLWAGMTGTMLPYAFSTPPDNTSWLLCDGRVLLASTPHTNLRAKLITDGFQFGQDGSGNPRIPDLRGRVPAGKDDMGGAAAGRLTAAGSGVNGTALGATGGAETHTLAAGQMPNHTHSGTTGNENATHTHAGTTGTESNTHVHNSSNYLWDTGSGTSGLGSPGGGTSGYAVQTTAPNNTSHTHAFTTGGQSSNHQHAFTTSAAGSGQAHNNTQPTIVTNWIIKT
Physico‐chemical
properties
protein length:229 AA
molecular weight: 23204,87400 Da
isoelectric point:6,47154
aromaticity:0,05240
hydropathy:-0,47249

Domains

Domains [InterPro]
DC_0033
STR
8–229
DC_0033
IPR037053
ATT
9–71
IPR037053
SSF88874
STR
10–228
SSF88874
IPR011083
ATT
13–75
IPR011083
QOE32750.1
1 229
Architecture
ATT
STR
ATT 8-75 | STR 76-229
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Achromobacter phage Mano
[NCBI] 		2767570 Uroviricota > Caudoviricetes > Manovirus >
Host Achromobacter sp.
[NCBI] 		134375 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QOE32750.1 [NCBI]
Genbank nucleotide accession
MT708550 [NCBI]
CDS location
range 13590 -> 14279
strand +
CDS
ATGGCCGCCACACTTGACCTTTGGGCCGGCATGACTGGCACCATGTTGCCTTATGCGTTTTCGACCCCGCCCGACAACACCAGCTGGCTGCTGTGCGATGGCCGCGTGTTGCTGGCGTCCACCCCGCACACCAACCTGCGCGCCAAGCTGATTACGGACGGTTTCCAGTTCGGCCAAGACGGCAGCGGAAACCCGCGCATTCCCGACCTGCGCGGGCGTGTTCCTGCCGGAAAGGATGACATGGGCGGTGCCGCGGCTGGCCGCCTGACCGCCGCCGGTTCCGGCGTCAATGGCACGGCGCTGGGCGCCACTGGCGGCGCGGAAACCCATACCCTGGCCGCGGGCCAGATGCCGAACCACACGCACAGCGGCACGACCGGCAACGAAAACGCGACCCACACGCACGCCGGCACCACCGGAACCGAAAGCAATACGCACGTTCACAACTCATCCAATTACCTGTGGGATACGGGGTCCGGCACGTCCGGCCTGGGCAGCCCCGGCGGCGGCACGTCCGGCTATGCGGTGCAGACCACCGCGCCGAACAACACCAGCCACACGCACGCATTCACGACTGGCGGGCAATCCTCGAACCACCAGCACGCATTCACGACCAGCGCGGCGGGTAGCGGCCAGGCGCACAACAACACGCAGCCCACCATCGTCACCAACTGGATTATCAAGACCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
8184b1688fed148799200e35f66a8d231b17a8ccd971d58cf1ccdd8a9b07d9a0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7449
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Achromobacter sp. phage Mano Bartz,M.L., Yao,G.W., Le,T., Gonzalez,C., Young,R. and Liu,M. 2021-01-14 — GenBank