Phage RBP Database

Genbank accession

QOE32750.1 [GenBank]

Protein name

collar protein

RBP type

TF

Evidence RBPdetect

Probability 0,90

TF

Evidence RBPdetect2

Probability 0,99

Protein sequence

MAATLDLWAGMTGTMLPYAFSTPPDNTSWLLCDGRVLLASTPHTNLRAKLITDGFQFGQDGSGNPRIPDLRGRVPAGKDDMGGAAAGRLTAAGSGVNGTALGATGGAETHTLAAGQMPNHTHSGTTGNENATHTHAGTTGTESNTHVHNSSNYLWDTGSGTSGLGSPGGGTSGYAVQTTAPNNTSHTHAFTTGGQSSNHQHAFTTSAAGSGQAHNNTQPTIVTNWIIKT

Physico‐chemical properties

protein length:	229 AA
molecular weight:	23204,87400 Da
isoelectric point:	6,47154
aromaticity:	0,05240
hydropathy:	-0,47249

Domain architecture

QOE32750.1

1 229 aa

ATT 9–75 · STR 76–228 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR037053
ATT

IPR037053

SSF88874
STR

SSF88874

IPR011083
ATT

IPR011083

QOE32750.1

1229 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0033
STR

DC_0033

QOE32750.1

1229 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR037053	ATT	IPR037053	9	71	Merged direct domain	Phage tail collar domain superfamily	N-terminal	Low	Positional only	37 proteins / 37 hits
SSF88874	STR	SSF88874	10	228	Merged direct domain	SSF88874	Central	Low	Positional only	109 proteins / 109 hits
IPR011083	ATT	DC_0235	13	75	InterPro cluster	Phage tail collar domain	C-terminal	Medium	Text match	1051 proteins / 1051 hits

Proteins with similar domain architecture

Phage

Achromobacter phage Mano [NCBI] · taxon 2767570

Uroviricota Caudoviricetes Manovirus

Host

Achromobacter sp. [NCBI] · taxon 134375

cellular organisms Bacteria Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales

Genbank protein accession

QOE32750.1 [NCBI]

Genbank nucleotide accession

MT708550 [NCBI]

CDS location

range 13590 -> 14279
strand +

CDS

ATGGCCGCCACACTTGACCTTTGGGCCGGCATGACTGGCACCATGTTGCCTTATGCGTTTTCGACCCCGCCCGACAACACCAGCTGGCTGCTGTGCGATGGCCGCGTGTTGCTGGCGTCCACCCCGCACACCAACCTGCGCGCCAAGCTGATTACGGACGGTTTCCAGTTCGGCCAAGACGGCAGCGGAAACCCGCGCATTCCCGACCTGCGCGGGCGTGTTCCTGCCGGAAAGGATGACATGGGCGGTGCCGCGGCTGGCCGCCTGACCGCCGCCGGTTCCGGCGTCAATGGCACGGCGCTGGGCGCCACTGGCGGCGCGGAAACCCATACCCTGGCCGCGGGCCAGATGCCGAACCACACGCACAGCGGCACGACCGGCAACGAAAACGCGACCCACACGCACGCCGGCACCACCGGAACCGAAAGCAATACGCACGTTCACAACTCATCCAATTACCTGTGGGATACGGGGTCCGGCACGTCCGGCCTGGGCAGCCCCGGCGGCGGCACGTCCGGCTATGCGGTGCAGACCACCGCGCCGAACAACACCAGCCACACGCACGCATTCACGACTGGCGGGCAATCCTCGAACCACCAGCACGCATTCACGACCAGCGCGGCGGGTAGCGGCCAGGCGCACAACAACACGCAGCCCACCATCGTCACCAACTGGATTATCAAGACCTGA

Title	Authors	Date	PMID	Source
Complete genome sequence of Achromobacter sp. phage Mano	Bartz,M.L., Yao,G.W., Le,T., Gonzalez,C., Young,R. and Liu,M.	2021-01-14	—	GenBank

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Literature