Phage RBP Database

UniProt accession

A0A8S5SPL9 [UniProt]

Protein name

YadA-like protein

RBP type

TSP

Evidence DepoScope

Probability 1,00

TF

Evidence RBPdetect2

Probability 0,51

Protein sequence

MNKTLTTALAISALAVNVAGATSNNTVGGTDNTISATSTSSAVWGFQNNIDANNALAFGTNNTVTGENGFAGGNNATAAGRNSFAFGSHAESLVEYTVAIGNQARVSSYDSVAIGNGAFVSGESSVALGRTNNVTGENSVAIGANNGTVAGGQSAVIGYNNKIGSQKEQLVFGSNSESNGQGALTFGTHAKSLATDAVAFGNNTIADQANSVAIGTNSVTDSAVGVDGITINGTRHVFAGEQPASVVSFGSKARAGAGGVTQYNRQLTNVSAGQISADSLDAVNGSQLYAAIDEIETNAKQINNNKTAIIKTQNNLKDLAVGVQMLGDVVNDHEQAIAGHTTAIANNTARINGNTSAINTLGQKVTANTADIRALEHVADNHEGRITTLENRSLGLANDINNKVNNLGQRVNKLGASSAALAGLHPLDFNRNDKVSYAVSYGHYRNSNAVALGVFARPNERIMLGFGATLGGENQYTVNVAFKTGKGSDYIAEAKDAQSRISKLEALVNKLMSEVEANK

Physico‐chemical properties

protein length:	519 AA
molecular weight:	53218,67860 Da
isoelectric point:	6,01075
aromaticity:	0,05010
hydropathy:	-0,20617

Domain architecture

A0A8S5SPL9

1 519 aa

STR 4–320 · RBD 381–429 · ATT 430–485 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR011049
STR

IPR011049 G3DSA:2.60.40.4050 IPR011049 G3DSA:1.20.5.170 Coil IPR045584 Coil

cd12820
STR

cd12820 IPR008640 IPR008635 G3DSA:3.30.1300.30

IPR008640
Unmapped

IPR008640 IPR011049 IPR005594

IPR011049
STR

IPR011049

IPR008640
Unmapped

IPR008640 IPR008640

A0A8S5SPL9

1519 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0394
RBD

DC_0394

A0A8S5SPL9

1519 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR011049	STR	IPR011049	4	101	Merged direct domain	Serralysin-like metalloprotease, C-terminal	Central	Low	Positional only	81 proteins / 81 hits
cd12820	STR	DC_0258	24	146	InterPro cluster	cd12820	Central	Low	Positional only	46 proteins / 51 hits
IPR008640	Unmapped	-	53	76	InterPro	Trimeric autotransporter adhesin YadA-like, head domain	-	-	-	-
IPR011049	STR	IPR011049	96	290	Merged direct domain	Serralysin-like metalloprotease, C-terminal	Central	Low	Positional only	81 proteins / 81 hits
IPR011049	STR	IPR011049	96	292	Merged direct domain	Serralysin-like metalloprotease, C-terminal	Central	Low	Positional only	81 proteins / 81 hits
IPR008640	Unmapped	-	96	118	InterPro	Trimeric autotransporter adhesin YadA-like, head domain	-	-	-	-
G3DSA:2.60.40.4050	STR	G3DSA:2.60.40.4050	102	145	Merged direct domain	G3DSA:2.60.40.4050	Central	Low	Positional only	5 proteins / 5 hits
IPR008640	Unmapped	-	121	145	InterPro	Trimeric autotransporter adhesin YadA-like, head domain	-	-	-	-
IPR011049	STR	IPR011049	146	270	Merged direct domain	Serralysin-like metalloprotease, C-terminal	Central	Low	Positional only	81 proteins / 81 hits
IPR008640	Unmapped	-	195	218	InterPro	Trimeric autotransporter adhesin YadA-like, head domain	-	-	-	-
IPR008635	RBD	DC_0221	266	308	InterPro cluster	Trimeric autotransporter adhesin YadA-like, stalk domain	C-terminal	Medium	Text match	14 proteins / 17 hits
G3DSA:1.20.5.170	STR	G3DSA:1.20.5.170	272	320	Merged direct domain	G3DSA:1.20.5.170	Central	Low	Positional only	8 proteins / 8 hits
Coil	Unmapped	-	372	392	Coils	Coil	-	-	-	-
G3DSA:3.30.1300.30	RBD	G3DSA:3.30.1300.30	381	485	Merged direct domain	G3DSA:3.30.1300.30	C-terminal	Low	Positional only	62 proteins / 62 hits
IPR045584	RBD	IPR045584	397	482	Merged direct domain	Pilin-like	C-terminal	Low	Positional only	5 proteins / 5 hits
IPR005594	ATT	DC_0200	430	480	InterPro cluster	Trimeric autotransporter adhesin YadA-like, C-terminal membrane anchor domain	C-terminal	Medium	Text match	43 proteins / 43 hits
Coil	Unmapped	-	494	514	Coils	Coil	-	-	-	-

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

A0A8S5SPL9

1 519 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	10	10	0,0014
Central domain	11	254	245	0,8086
C-terminal	255	519	264	0,1596

Note: Constraints were applied during segmentation.
Fixed 25 C-terminal predictions appearing before Central domain

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Caudovirales sp. ctGAB12 [NCBI] · taxon 2827632

Uroviricota Caudoviricetes

Host No host information

Genbank protein accession

DAF52880.1 [NCBI]

Genbank nucleotide accession

BK032644 [NCBI]

CDS location

range 11615 -> 13174
strand +

CDS

ATGAACAAAACATTAACAACAGCATTGGCAATTTCCGCGTTGGCAGTAAACGTAGCTGGCGCAACTAGTAACAACACAGTAGGCGGTACAGATAATACTATTTCCGCAACGTCTACAAGCTCCGCAGTATGGGGCTTCCAAAACAACATCGACGCTAATAATGCGTTAGCGTTCGGTACTAACAATACTGTAACTGGTGAAAATGGTTTCGCAGGTGGTAATAATGCTACTGCAGCAGGTCGTAACTCCTTTGCATTTGGCTCCCATGCCGAAAGTTTGGTGGAGTACACCGTGGCAATCGGAAATCAAGCTCGTGTGTCTAGCTACGACAGCGTGGCTATCGGTAATGGCGCGTTCGTATCCGGTGAATCTAGTGTGGCTCTAGGCCGTACTAATAACGTTACCGGGGAGAACTCGGTAGCAATCGGTGCTAACAATGGCACAGTAGCAGGTGGACAAAGCGCCGTAATCGGATATAACAACAAAATTGGTTCCCAAAAGGAACAATTAGTGTTCGGGTCTAATTCCGAATCTAATGGTCAAGGTGCTCTTACATTTGGCACTCATGCCAAATCCTTAGCCACTGATGCCGTTGCATTTGGTAACAACACGATTGCTGACCAAGCGAATTCGGTAGCAATCGGTACTAACAGCGTTACAGATAGCGCCGTTGGTGTTGATGGTATCACAATTAATGGTACTCGCCACGTATTTGCAGGCGAGCAACCGGCAAGCGTAGTAAGTTTTGGTTCTAAAGCTCGCGCTGGTGCAGGCGGGGTAACTCAATACAACCGCCAACTCACGAATGTGAGCGCTGGTCAAATCTCCGCTGATTCATTAGACGCTGTGAACGGCTCCCAGTTGTATGCTGCGATTGATGAAATCGAAACTAACGCTAAACAAATTAACAACAATAAAACGGCTATTATTAAAACACAAAACAACCTAAAAGACTTGGCCGTAGGTGTTCAAATGTTAGGCGACGTGGTGAACGATCATGAACAAGCTATCGCAGGTCATACTACTGCAATCGCTAACAACACTGCCCGCATCAATGGTAATACATCTGCTATCAATACTCTTGGCCAAAAGGTAACTGCTAATACAGCAGATATCAGAGCCCTTGAACATGTAGCAGACAATCATGAAGGTCGTATCACGACCTTAGAAAATCGTTCTTTAGGCTTAGCGAATGACATTAACAACAAGGTCAACAATCTTGGCCAACGTGTTAATAAGTTAGGCGCAAGCTCCGCAGCACTTGCTGGCTTACATCCATTAGACTTTAACAGAAATGACAAAGTCAGCTATGCTGTAAGTTACGGCCACTACCGTAACAGTAATGCAGTAGCGCTCGGCGTATTCGCAAGACCTAATGAACGTATCATGCTTGGCTTTGGTGCTACGTTAGGTGGTGAGAACCAATACACAGTAAACGTAGCATTCAAAACTGGTAAAGGTTCTGACTACATTGCTGAAGCCAAAGATGCACAAAGCCGTATTTCTAAACTTGAAGCACTCGTAAACAAATTAATGTCTGAAGTAGAAGCTAACAAATAA

	Description	Category	Evidence (source)
GO:0019867	outer membrane	Cellular Component	IEA:InterPro (UniProt)
GO:0015031	protein transport	Biological Process	IEA:UniProtKB-KW (UniProt)

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Gene Ontology

Tertiary structure

Predicted Aligned Error (PAE)