Protein

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UniProt accession

A0A8S5SPL9 [UniProt]

Protein name

YadA-like protein

RBP type

TSP

Evidence DepoScope

Probability 1,00

Protein sequence

MNKTLTTALAISALAVNVAGATSNNTVGGTDNTISATSTSSAVWGFQNNIDANNALAFGTNNTVTGENGFAGGNNATAAGRNSFAFGSHAESLVEYTVAIGNQARVSSYDSVAIGNGAFVSGESSVALGRTNNVTGENSVAIGANNGTVAGGQSAVIGYNNKIGSQKEQLVFGSNSESNGQGALTFGTHAKSLATDAVAFGNNTIADQANSVAIGTNSVTDSAVGVDGITINGTRHVFAGEQPASVVSFGSKARAGAGGVTQYNRQLTNVSAGQISADSLDAVNGSQLYAAIDEIETNAKQINNNKTAIIKTQNNLKDLAVGVQMLGDVVNDHEQAIAGHTTAIANNTARINGNTSAINTLGQKVTANTADIRALEHVADNHEGRITTLENRSLGLANDINNKVNNLGQRVNKLGASSAALAGLHPLDFNRNDKVSYAVSYGHYRNSNAVALGVFARPNERIMLGFGATLGGENQYTVNVAFKTGKGSDYIAEAKDAQSRISKLEALVNKLMSEVEANK

Physico‐chemical properties

protein length:	519 AA
molecular weight:	53218,67860 Da
isoelectric point:	6,01075
aromaticity:	0,05010
hydropathy:	-0,20617

Domains

Domains [InterPro]

IPR011049
STR
4–101

IPR011049 G3DSA:2.60.40.4050 IPR011049 G3DSA:1.20.5.170 Coil IPR045584 Coil

DC_0394
RBD
6–109

DC_0394 IPR008640 IPR008640 IPR008635 G3DSA:3.30.1300.30

cd12820
STR
24–146

cd12820 IPR005594

IPR008640
Unmapped
53–76

IPR008640 IPR011049

IPR011049
STR
96–292

IPR011049

IPR008640
Unmapped
96–118

IPR008640

A0A8S5SPL9

1 519

Architecture

STR

RBD

ATT

STR 4-320 | RBD 381-429 | ATT 430-485 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR011049	STR	IPR011049	4	101	Merged direct domain	Serralysin-like metalloprotease, C-terminal	Central	Low	Positional only	81 proteins / 81 hits
DC_0394	RBD	DC_0394	6	109	Novel HMM	DC_0394	C-terminal	Low	Positional only	49 proteins / 49 hits
cd12820	STR	DC_0258	24	146	InterPro cluster	cd12820	Central	Low	Positional only	46 proteins / 51 hits
IPR008640	Unmapped	-	53	76	InterPro	Trimeric autotransporter adhesin YadA-like, head domain	-	-	-	-
IPR011049	STR	IPR011049	96	290	Merged direct domain	Serralysin-like metalloprotease, C-terminal	Central	Low	Positional only	81 proteins / 81 hits
IPR011049	STR	IPR011049	96	292	Merged direct domain	Serralysin-like metalloprotease, C-terminal	Central	Low	Positional only	81 proteins / 81 hits
IPR008640	Unmapped	-	96	118	InterPro	Trimeric autotransporter adhesin YadA-like, head domain	-	-	-	-
G3DSA:2.60.40.4050	STR	G3DSA:2.60.40.4050	102	145	Merged direct domain	G3DSA:2.60.40.4050	Central	Low	Positional only	5 proteins / 5 hits
IPR008640	Unmapped	-	121	145	InterPro	Trimeric autotransporter adhesin YadA-like, head domain	-	-	-	-
IPR011049	STR	IPR011049	146	270	Merged direct domain	Serralysin-like metalloprotease, C-terminal	Central	Low	Positional only	81 proteins / 81 hits
IPR008640	Unmapped	-	195	218	InterPro	Trimeric autotransporter adhesin YadA-like, head domain	-	-	-	-
IPR008635	RBD	DC_0221	266	308	InterPro cluster	Trimeric autotransporter adhesin YadA-like, stalk domain	C-terminal	Medium	Text match	14 proteins / 17 hits
G3DSA:1.20.5.170	STR	G3DSA:1.20.5.170	272	320	Merged direct domain	G3DSA:1.20.5.170	Central	Low	Positional only	8 proteins / 8 hits
Coil	Unmapped	-	372	392	Coils	Coil	-	-	-	-
G3DSA:3.30.1300.30	RBD	G3DSA:3.30.1300.30	381	485	Merged direct domain	G3DSA:3.30.1300.30	C-terminal	Low	Positional only	62 proteins / 62 hits
IPR045584	RBD	IPR045584	397	482	Merged direct domain	Pilin-like	C-terminal	Low	Positional only	5 proteins / 5 hits
IPR005594	ATT	DC_0200	430	480	InterPro cluster	Trimeric autotransporter adhesin YadA-like, C-terminal membrane anchor domain	C-terminal	Medium	Text match	43 proteins / 43 hits
Coil	Unmapped	-	494	514	Coils	Coil	-	-	-	-

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

A0A8S5SPL9

1 519

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	10	10	0,0014
Central domain	11	254	245	0,8086
C-terminal	255	519	264	0,1596

Note: Constraints were applied during segmentation.
Fixed 25 C-terminal predictions appearing before Central domain

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-10

Central
11-254

C-terminal
255-519

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Caudovirales sp. ctGAB12 [NCBI]	2827632	Uroviricota > Caudoviricetes >
Host	No host information

Coding sequence (CDS)

Genbank protein accession

DAF52880.1 [NCBI]

Genbank nucleotide accession

BK032644 [NCBI]

CDS location

range 11615 -> 13174
strand +

CDS

ATGAACAAAACATTAACAACAGCATTGGCAATTTCCGCGTTGGCAGTAAACGTAGCTGGCGCAACTAGTAACAACACAGTAGGCGGTACAGATAATACTATTTCCGCAACGTCTACAAGCTCCGCAGTATGGGGCTTCCAAAACAACATCGACGCTAATAATGCGTTAGCGTTCGGTACTAACAATACTGTAACTGGTGAAAATGGTTTCGCAGGTGGTAATAATGCTACTGCAGCAGGTCGTAACTCCTTTGCATTTGGCTCCCATGCCGAAAGTTTGGTGGAGTACACCGTGGCAATCGGAAATCAAGCTCGTGTGTCTAGCTACGACAGCGTGGCTATCGGTAATGGCGCGTTCGTATCCGGTGAATCTAGTGTGGCTCTAGGCCGTACTAATAACGTTACCGGGGAGAACTCGGTAGCAATCGGTGCTAACAATGGCACAGTAGCAGGTGGACAAAGCGCCGTAATCGGATATAACAACAAAATTGGTTCCCAAAAGGAACAATTAGTGTTCGGGTCTAATTCCGAATCTAATGGTCAAGGTGCTCTTACATTTGGCACTCATGCCAAATCCTTAGCCACTGATGCCGTTGCATTTGGTAACAACACGATTGCTGACCAAGCGAATTCGGTAGCAATCGGTACTAACAGCGTTACAGATAGCGCCGTTGGTGTTGATGGTATCACAATTAATGGTACTCGCCACGTATTTGCAGGCGAGCAACCGGCAAGCGTAGTAAGTTTTGGTTCTAAAGCTCGCGCTGGTGCAGGCGGGGTAACTCAATACAACCGCCAACTCACGAATGTGAGCGCTGGTCAAATCTCCGCTGATTCATTAGACGCTGTGAACGGCTCCCAGTTGTATGCTGCGATTGATGAAATCGAAACTAACGCTAAACAAATTAACAACAATAAAACGGCTATTATTAAAACACAAAACAACCTAAAAGACTTGGCCGTAGGTGTTCAAATGTTAGGCGACGTGGTGAACGATCATGAACAAGCTATCGCAGGTCATACTACTGCAATCGCTAACAACACTGCCCGCATCAATGGTAATACATCTGCTATCAATACTCTTGGCCAAAAGGTAACTGCTAATACAGCAGATATCAGAGCCCTTGAACATGTAGCAGACAATCATGAAGGTCGTATCACGACCTTAGAAAATCGTTCTTTAGGCTTAGCGAATGACATTAACAACAAGGTCAACAATCTTGGCCAACGTGTTAATAAGTTAGGCGCAAGCTCCGCAGCACTTGCTGGCTTACATCCATTAGACTTTAACAGAAATGACAAAGTCAGCTATGCTGTAAGTTACGGCCACTACCGTAACAGTAATGCAGTAGCGCTCGGCGTATTCGCAAGACCTAATGAACGTATCATGCTTGGCTTTGGTGCTACGTTAGGTGGTGAGAACCAATACACAGTAAACGTAGCATTCAAAACTGGTAAAGGTTCTGACTACATTGCTGAAGCCAAAGATGCACAAAGCCGTATTTCTAAACTTGAAGCACTCGTAAACAAATTAATGTCTGAAGTAGAAGCTAACAAATAA

Genome Context

Gene Ontology

	Description	Category	Evidence (source)
GO:0019867	outer membrane	Cellular Component	IEA:InterPro (UniProt)
GO:0015031	protein transport	Biological Process	IEA:UniProtKB-KW (UniProt)

Tertiary structure

PDB ID

b4a24318393497ea9237232f6a543cc0b1142f0446ca62a2c181ff9ae8ea061d

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,8752

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Gene Ontology

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence