Phage RBP Database

Genbank accession

YP_008770526.1 [GenBank]

Protein name

lytic tail fiber protein

RBP type

TF

Evidence GenBank

Probability 1,00

TF

Evidence Phold

Probability 1,00

TF

Evidence RBPdetect

Probability 0,89

Seq2Symm

C1 confidence 0,999

C1	0,999
C2	0,004
C3	0,000

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MTSTSTETLKNKGTAVKGGIKNAQPGDLLFFDTYKKNGHVVIYLGNNQFIGAQGKTGVGIVDMNSSYGKYFTKRFSGNIRRIAGGGNVGAALGGGGAAMSGAGTGTAYRQAPSNLMGPINNAAKQYGVNPNLIAAIIKKESTFKSGLTSSAGAKGYMQLMPATARAMGVKNPWDTQQNINGGTKYIAQQLKTYKNNIPLALAAYNWGPGNLNKAIRKAGGSKDWNQIRRFAPKETRDYVDKIMGWR

Physico‐chemical properties

protein length:	246 AA
molecular weight:	26181,56630 Da
isoelectric point:	10,25345
aromaticity:	0,08943
hydropathy:	-0,46341

Domain architecture

YP_008770526.1

1 246 aa

STR 1–86 · STR 109–246

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

G3DSA:3.90.1720.10
RBD

G3DSA:3.90.1720.10 IPR023346

IPR000064
ENZ

IPR000064 G3DSA:1.10.530.10

IPR038765
STR

IPR038765 PTHR37423

IPR000064
ENZ

IPR000064 IPR008258

G3DSA:1.10.530.10
RBD

G3DSA:1.10.530.10

cd00254
ENZ

cd00254

YP_008770526.1

1246 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
G3DSA:3.90.1720.10	RBD	G3DSA:3.90.1720.10	1	86	Merged direct domain	G3DSA:3.90.1720.10	C-terminal	Low	Positional only	22 proteins / 22 hits
IPR000064	ENZ	DC_0076	1	82	InterPro cluster	Endopeptidase, NLPC/P60 domain	Central	High	Text match	22 proteins / 43 hits
IPR038765	STR	IPR038765	10	81	Merged direct domain	Papain-like cysteine peptidase superfamily	Central	Low	Positional only	7 proteins / 7 hits
IPR000064	ENZ	DC_0076	10	72	InterPro cluster	Endopeptidase, NLPC/P60 domain	Central	High	Text match	22 proteins / 43 hits
IPR023346	STR	IPR023346	109	244	Merged direct domain	Lysozyme-like domain superfamily	Central	Low	Positional only	29 proteins / 29 hits
G3DSA:1.10.530.10	RBD	G3DSA:1.10.530.10	110	246	Merged direct domain	G3DSA:1.10.530.10	C-terminal	Low	Positional only	95 proteins / 95 hits
PTHR37423	Unmapped	-	110	244	PANTHER	SOLUBLE LYTIC MUREIN TRANSGLYCOSYLASE-RELATED	-	-	-	-
IPR008258	ENZ	DC_0010	119	226	InterPro cluster	Transglycosylase SLT domain 1	C-terminal	High	Text match	100 proteins / 142 hits
G3DSA:1.10.530.10	RBD	G3DSA:1.10.530.10	120	246	Merged direct domain	G3DSA:1.10.530.10	C-terminal	Low	Positional only	95 proteins / 95 hits
cd00254	ENZ	DC_0010	130	244	InterPro cluster	cd00254	C-terminal	High	Text match	100 proteins / 142 hits

Proteins with similar domain architecture

Phage

Bacillus phage Page [NCBI] · taxon 1406786

Uroviricota Caudoviricetes Pagevirus

Host

Bacillus megaterium [NCBI] · taxon 1404

cellular organisms Bacteria Bacillati Bacillota Bacilli Bacillales

Genbank protein accession

YP_008770526.1 [NCBI]

Genbank nucleotide accession

NC_022764.1 [NCBI]

CDS location

range 19040 -> 19780
strand +

CDS

TTGACCAGCACTTCAACAGAGACATTGAAAAATAAGGGAACGGCAGTAAAGGGCGGCATTAAAAACGCTCAACCCGGCGACTTACTTTTCTTTGATACATACAAGAAAAATGGTCACGTTGTTATTTATCTCGGAAACAATCAATTCATTGGTGCTCAGGGTAAAACAGGTGTCGGCATTGTCGATATGAATAGCTCTTACGGTAAATACTTCACGAAACGTTTTAGCGGCAATATTCGCCGTATCGCAGGCGGCGGAAACGTTGGGGCTGCTCTAGGTGGTGGCGGTGCTGCCATGAGTGGAGCGGGTACAGGTACGGCATATAGGCAAGCGCCTTCTAACTTAATGGGCCCGATTAATAACGCGGCTAAACAATACGGTGTAAATCCAAACTTAATTGCTGCTATTATTAAAAAAGAATCAACGTTTAAAAGCGGCTTAACTTCTTCTGCTGGTGCTAAGGGCTACATGCAATTAATGCCTGCTACCGCTCGTGCTATGGGAGTTAAAAACCCCTGGGATACTCAACAAAACATTAACGGCGGTACAAAGTATATAGCGCAGCAGCTTAAAACTTACAAGAACAACATACCTCTTGCGTTAGCTGCTTATAACTGGGGACCGGGCAACTTGAATAAAGCTATTCGTAAAGCCGGAGGAAGCAAAGATTGGAATCAAATTCGCCGCTTTGCTCCAAAAGAAACGCGTGATTATGTAGATAAAATTATGGGTTGGAGGTAG

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)