Phage RBP Database

Genbank accession

XRM23953.1 [GenBank]

Protein name

baseplate wedge subunit

RBP type

TF

Evidence UniProt/TrEMBL

Probability 1,00

TSP

Evidence RBPdetect2

Probability 0,58

Protein sequence

MAFFKQTPKQLIDTGEIGNASTGDILFDGGNKINDDINAIYNAFGDQRKMAVADGTGPTGQTIHATGYYQKGKAVDYQTPIKPGTMHDIDASDGGVIVIIDRPELGDSVEFINSNGSISVNNPLSIQVTDGSIKGVLNNLVISTPYTHVVLRCIELNGPTSVWNYSTDSMFGQKESPVDGTWSLTGNTVSIPLFYRTDYNMAKLLVTCQSADGRKIKTCEINILIDTINSEVLSTEFAVMRVGNVDETDEIANISFSIINNFATMTITSDIIGLRSAVKIISTQKIGVAQ

Physico‐chemical properties

protein length:	290 AA
molecular weight:	31273,91680 Da
isoelectric point:	4,66577
aromaticity:	0,06897
hydropathy:	-0,06828

Domain architecture

XRM23953.1

1 290 aa

ATT 4–270 · STR 271–290

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR036240
STR

IPR036240

IPR008987
ATT

IPR008987 IPR056391

G3DSA:1.20.5.960
Unmapped

G3DSA:1.20.5.960 IPR027411 IPR027412

XRM23953.1

1290 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR036240	STR	IPR036240	4	290	Merged direct domain	Gp9-like superfamily	Central	Low	Positional only	146 proteins / 146 hits
IPR008987	ATT	DC_0752	9	171	InterPro cluster	Baseplate structural protein Gp9/Gp10, N-terminal domain	Central	Medium	Text match	242 proteins / 243 hits
G3DSA:1.20.5.960	Unmapped	-	19	53	Gene3D	Bacteriophage t4 gene product 9 (gp9)	-	-	-	-
IPR027411	Unmapped	-	69	172	InterPro	Baseplate structural protein Gp9/Gp10 middle domain superfamily	-	-	-	-
IPR056391	ATT	DC_0417	172	270	InterPro cluster	Baseplate protein gp9-like, C-terminal	C-terminal	Medium	Text match	98 proteins / 98 hits
IPR027412	Unmapped	-	173	285	InterPro	Baseplate structural protein Gp9 C-terminal domain superfamily	-	-	-	-

Proteins with similar domain architecture

Phage

Escherichia phage vB_EcoM_JQD51 [NCBI] · taxon 3410945

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host

Escherichia coli O157 [NCBI] · taxon 1045010

Bacteria Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae Escherichia

Genbank protein accession

XRM23953.1 [NCBI]

Genbank nucleotide accession

PV204681 [NCBI]

CDS location

range 58652 -> 59524
strand +

CDS

ATGGCATTTTTTAAGCAAACTCCTAAACAATTAATCGATACCGGCGAAATTGGTAATGCCTCAACAGGTGATATCTTATTCGACGGTGGTAATAAAATAAATGACGATATCAACGCTATTTACAATGCATTTGGCGATCAACGTAAAATGGCCGTAGCAGATGGAACCGGACCTACAGGTCAAACTATTCATGCCACAGGCTATTATCAAAAAGGAAAGGCTGTCGATTATCAAACTCCTATTAAACCCGGCACCATGCATGATATTGATGCTTCTGATGGTGGTGTGATTGTTATTATTGACCGACCTGAATTAGGTGACTCTGTAGAATTCATAAACTCTAATGGGTCTATTTCTGTTAACAATCCTTTAAGTATCCAAGTAACCGATGGTTCAATTAAAGGCGTTCTCAATAACCTTGTTATTTCCACCCCTTATACCCATGTTGTTCTTCGTTGTATTGAACTTAATGGGCCAACTTCAGTATGGAATTATTCTACTGATAGCATGTTTGGGCAGAAAGAATCTCCTGTCGATGGGACTTGGAGTCTTACAGGAAACACAGTTTCTATTCCTCTGTTTTATCGCACAGATTATAACATGGCTAAATTGCTTGTTACATGCCAATCCGCCGACGGTAGAAAAATAAAAACATGCGAAATAAATATTCTAATAGATACAATTAACTCAGAAGTTCTTTCTACAGAATTTGCAGTAATGCGAGTTGGTAATGTAGATGAAACCGACGAGATTGCTAATATTAGCTTTAGTATTATTAACAACTTTGCTACTATGACGATTACATCTGATATTATTGGATTACGTTCAGCAGTTAAAATTATCTCAACTCAGAAAATTGGGGTCGCTCAATAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)