Protein

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Genbank accession
UJH95895.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSLLTYVTSALVKCKLAVTGSIERLLSDILSESMSVKDFGAKGDGVTDDSDALQAAMDASATAGYRLKLTSGNYRILKPLVLPSNLYMVGDGTSEIYLDPAMTVGASFGGIERAIYAIDKSNITLRKVNFRSSRSNFMKRITIAFLRCYNINVLHCNFDDFGGRDGVSSEYAQGLIMFETTDIVVSHSRFRNCSGDGLSYSNNCLRHHTSFCQFISNGDWGLAIVEGSNNGVIIGNLFIDNVSTATGSDRSSNLTFSSNVMINNEHGVRICEFASSSDTFQQVTIIGNDISQSNYGISVENARPQFGNFSVVGNTVKDSNQQGIQVVDSQLGTIVGNTVYSSSNAAILINAITPNKVTGLLSISGNTLSTAKYGIQEIRTVPTAGLAHNVVSGNNISAMSLSNTVLIDGNTSAILMDSTDFIKFNKSISLPSGITSLVANSGGTPLPVNAQGFLTLYFDDGTPIKVPYYQN
Physico‐chemical
properties
protein length:471 AA
molecular weight: 50346,03150 Da
isoelectric point:5,54751
aromaticity:0,07856
hydropathy:0,02633

Domains

Domains [InterPro]
DC_1082
ATT
2–30
DC_1082 IPR012334
IPR011050
STR
33–344
IPR011050 IPR006626
IPR012334
STR
34–419
IPR012334
IPR024535
ENZ
34–268
IPR024535 IPR039448
IPR006626
Unmapped
148–171
IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626
UJH95895.1
1 471
Architecture
ATT
STR
ATT 2-30 | STR 31-419 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UJH95895.1
1 471
Domain Start End Length (AA) Confidence
N-terminal 1 49 49 0,9679
Central domain 50 426 378 0,9850
C-terminal 427 471 44 0,9535
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-49
Central
50-426
C-terminal
427-471

Taxonomy

  Name Taxonomy ID Lineage
Phage Pantoea phage Nufs112
[NCBI] 		2894290 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pantoea agglomerans
[NCBI] 		549 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UJH95895.1 [NCBI]
Genbank nucleotide accession
OK570185.1 [NCBI]
CDS location
range 43074 -> 44489
strand +
CDS
ATGTCATTACTGACTTACGTCACAAGTGCGCTGGTCAAGTGTAAGCTTGCGGTCACTGGTTCAATTGAGAGATTACTTTCTGATATTTTATCAGAGAGCATGAGCGTTAAAGACTTCGGTGCCAAGGGTGACGGTGTTACTGATGACTCAGATGCACTGCAAGCTGCTATGGATGCTTCAGCTACAGCTGGGTACAGACTTAAGCTTACATCAGGAAATTATCGTATCCTCAAGCCGCTTGTCCTACCAAGCAACCTTTACATGGTTGGTGATGGTACATCAGAGATTTACTTGGACCCTGCAATGACGGTAGGTGCAAGCTTCGGTGGTATTGAGCGAGCAATCTATGCTATTGACAAGAGCAACATCACCTTACGTAAGGTTAACTTTCGAAGTAGCAGAAGCAACTTTATGAAGAGGATTACCATCGCATTTCTGCGCTGCTATAATATCAATGTGCTTCATTGCAACTTTGATGACTTTGGTGGTCGTGACGGTGTAAGCTCAGAGTACGCACAGGGTCTGATTATGTTCGAGACTACTGATATTGTTGTTAGTCACTCGCGCTTCCGTAACTGCTCAGGTGACGGACTTTCTTATAGCAACAATTGCTTGCGTCATCATACCAGCTTCTGTCAGTTCATCAGTAATGGTGACTGGGGTCTGGCTATTGTTGAAGGAAGTAATAATGGTGTAATCATAGGTAACCTTTTCATCGATAATGTCTCAACGGCTACTGGCTCTGACAGGTCATCTAACCTGACATTCAGTTCCAACGTTATGATTAACAATGAGCACGGTGTACGTATCTGTGAGTTCGCATCTTCCTCTGATACCTTCCAGCAAGTGACCATCATTGGTAATGACATCTCTCAGAGCAACTACGGTATTTCTGTAGAGAATGCAAGACCACAGTTCGGTAACTTCAGTGTCGTTGGCAACACTGTGAAGGACTCTAACCAACAAGGCATACAGGTTGTTGATAGCCAGCTTGGTACTATCGTAGGTAACACAGTCTACAGCTCTTCAAATGCTGCAATACTTATTAATGCAATTACGCCTAATAAGGTTACCGGATTACTGTCCATCAGTGGCAACACTCTGTCTACAGCTAAGTATGGTATCCAGGAGATTCGGACTGTACCAACAGCTGGTCTGGCACATAACGTTGTTTCTGGTAATAACATCAGCGCTATGTCCCTTTCTAATACGGTGCTTATTGATGGTAACACCTCTGCAATCTTGATGGACTCTACAGATTTCATTAAGTTCAATAAGTCAATCAGCTTGCCGTCAGGCATCACAAGTCTGGTAGCAAACAGTGGTGGTACTCCGTTGCCAGTGAATGCACAGGGCTTCTTGACCCTGTACTTTGATGACGGTACACCTATCAAGGTTCCGTACTACCAAAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9d709b8403a06249e52cdc64c40f663cd587b7ec291fcfb95073ee8144298118
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8237
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Pantoea phage Nufs112 Dislers,A., Zrelovs,N. and Kazaks,A. 2012-10-15 — GenBank