Protein

View in Explore
Genbank accession
UJH95895.1 [GenBank]
Protein name
tailspike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
TF
Evidence Phold
Probability 1,00
Protein sequence
MSLLTYVTSALVKCKLAVTGSIERLLSDILSESMSVKDFGAKGDGVTDDSDALQAAMDASATAGYRLKLTSGNYRILKPLVLPSNLYMVGDGTSEIYLDPAMTVGASFGGIERAIYAIDKSNITLRKVNFRSSRSNFMKRITIAFLRCYNINVLHCNFDDFGGRDGVSSEYAQGLIMFETTDIVVSHSRFRNCSGDGLSYSNNCLRHHTSFCQFISNGDWGLAIVEGSNNGVIIGNLFIDNVSTATGSDRSSNLTFSSNVMINNEHGVRICEFASSSDTFQQVTIIGNDISQSNYGISVENARPQFGNFSVVGNTVKDSNQQGIQVVDSQLGTIVGNTVYSSSNAAILINAITPNKVTGLLSISGNTLSTAKYGIQEIRTVPTAGLAHNVVSGNNISAMSLSNTVLIDGNTSAILMDSTDFIKFNKSISLPSGITSLVANSGGTPLPVNAQGFLTLYFDDGTPIKVPYYQN
Physico‐chemical
properties
protein length:471 AA
molecular weight: 50346,03150 Da
isoelectric point:5,54751
aromaticity:0,07856
hydropathy:0,02633

Domains

Domains [InterPro]
IPR011050
33–344
IPR011050 IPR006626
IPR012334
34–419
IPR012334
IPR024535
34–268
IPR024535 IPR039448
IPR006626
148–171
IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626
UJH95895.1
1 471
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pantoea phage Nufs112
[NCBI] 		2894290 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UJH95895.1 [NCBI]
Genbank nucleotide accession
OK570185 [NCBI]
CDS location
range 43074 -> 44489
strand +
CDS
ATGTCATTACTGACTTACGTCACAAGTGCGCTGGTCAAGTGTAAGCTTGCGGTCACTGGTTCAATTGAGAGATTACTTTCTGATATTTTATCAGAGAGCATGAGCGTTAAAGACTTCGGTGCCAAGGGTGACGGTGTTACTGATGACTCAGATGCACTGCAAGCTGCTATGGATGCTTCAGCTACAGCTGGGTACAGACTTAAGCTTACATCAGGAAATTATCGTATCCTCAAGCCGCTTGTCCTACCAAGCAACCTTTACATGGTTGGTGATGGTACATCAGAGATTTACTTGGACCCTGCAATGACGGTAGGTGCAAGCTTCGGTGGTATTGAGCGAGCAATCTATGCTATTGACAAGAGCAACATCACCTTACGTAAGGTTAACTTTCGAAGTAGCAGAAGCAACTTTATGAAGAGGATTACCATCGCATTTCTGCGCTGCTATAATATCAATGTGCTTCATTGCAACTTTGATGACTTTGGTGGTCGTGACGGTGTAAGCTCAGAGTACGCACAGGGTCTGATTATGTTCGAGACTACTGATATTGTTGTTAGTCACTCGCGCTTCCGTAACTGCTCAGGTGACGGACTTTCTTATAGCAACAATTGCTTGCGTCATCATACCAGCTTCTGTCAGTTCATCAGTAATGGTGACTGGGGTCTGGCTATTGTTGAAGGAAGTAATAATGGTGTAATCATAGGTAACCTTTTCATCGATAATGTCTCAACGGCTACTGGCTCTGACAGGTCATCTAACCTGACATTCAGTTCCAACGTTATGATTAACAATGAGCACGGTGTACGTATCTGTGAGTTCGCATCTTCCTCTGATACCTTCCAGCAAGTGACCATCATTGGTAATGACATCTCTCAGAGCAACTACGGTATTTCTGTAGAGAATGCAAGACCACAGTTCGGTAACTTCAGTGTCGTTGGCAACACTGTGAAGGACTCTAACCAACAAGGCATACAGGTTGTTGATAGCCAGCTTGGTACTATCGTAGGTAACACAGTCTACAGCTCTTCAAATGCTGCAATACTTATTAATGCAATTACGCCTAATAAGGTTACCGGATTACTGTCCATCAGTGGCAACACTCTGTCTACAGCTAAGTATGGTATCCAGGAGATTCGGACTGTACCAACAGCTGGTCTGGCACATAACGTTGTTTCTGGTAATAACATCAGCGCTATGTCCCTTTCTAATACGGTGCTTATTGATGGTAACACCTCTGCAATCTTGATGGACTCTACAGATTTCATTAAGTTCAATAAGTCAATCAGCTTGCCGTCAGGCATCACAAGTCTGGTAGCAAACAGTGGTGGTACTCCGTTGCCAGTGAATGCACAGGGCTTCTTGACCCTGTACTTTGATGACGGTACACCTATCAAGGTTCCGTACTACCAAAACTAA

Tertiary structure

PDB ID
9d709b8403a06249e52cdc64c40f663cd587b7ec291fcfb95073ee8144298118
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8237
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Pantoea phage Nufs112 Dislers,A., Zrelovs,N. and Kazaks,A. 2012-10-15 — GenBank