Protein

View in Explore
Genbank accession
AUR89485.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MATKLFSVEGVGPKVELGKDGHVIDGQNAAYVKVTDKDDTLLPVKGGDATASDEFVTQSQLDAVEAKTGGYLSYSYDASSGISQLSGQGSGDAGAIQYMDTFKVTTGGSFLGSTAEAGDFVIALTAGADVSDNTGSNTDWLLDTRRTAGDLADDTTLEASGGQIQIKDGGVSSAKLAADAVNSGSLVADDVIDSEHIAAGALDNEHYADVSITNGKIANSTIEKAKLVAAVQTTLTNADTQYGTRNGNFESAIGGSFDSDSDAAIAAQTNYATNTTITGQLSQLDSRMKLDNDDNALRVVSASHSGGAQNIGSAVKSGRTLTAVKILPVTVANGADATMSIGISGDASKYVSVADIDLYESTVQVIQLAHTLGSDEQLIATVTQGTATQGTFTVVVEHG
Physico‐chemical
properties
protein length:399 AA
molecular weight: 40687,89340 Da
isoelectric point:4,25391
aromaticity:0,04762
hydropathy:-0,13008

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR89485.1
1 399
Domain Start End Length (AA) Confidence
N-terminal 1 250 250 0,7895
Central domain 251 388 139 0,0455
C-terminal 389 399 10 0,9978
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-250
Central
251-388
C-terminal
389-399

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.123.O._10N.286.48.F3
[NCBI] 		2070727 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Enterovibrio norvegicus
[NCBI] 		188144 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR89485.1 [NCBI]
Genbank nucleotide accession
MG592498 [NCBI]
CDS location
range 36158 -> 37357
strand -
CDS
ATGGCTACTAAATTATTCAGTGTTGAGGGTGTAGGCCCTAAAGTTGAACTAGGTAAAGACGGTCACGTCATTGACGGTCAGAATGCGGCATACGTCAAAGTAACTGACAAAGATGACACGCTTCTTCCTGTTAAAGGCGGCGATGCAACTGCCTCTGATGAGTTCGTGACACAGTCGCAGCTTGACGCGGTAGAGGCTAAGACTGGTGGTTACCTTTCTTACAGCTACGATGCATCAAGCGGCATCTCTCAGCTATCAGGTCAAGGCTCTGGTGATGCTGGTGCAATTCAGTACATGGACACCTTCAAGGTAACCACTGGCGGCTCATTCCTTGGCTCAACTGCCGAGGCTGGCGACTTCGTTATCGCATTGACTGCTGGCGCTGACGTATCAGACAACACCGGATCAAACACCGATTGGTTGCTTGACACTCGCCGCACTGCCGGTGATTTAGCTGATGACACCACGCTTGAAGCGTCTGGCGGTCAGATTCAGATTAAGGATGGCGGCGTAAGCTCTGCAAAACTTGCTGCTGACGCTGTGAACTCCGGCTCTTTGGTTGCTGATGACGTCATCGACTCTGAGCACATCGCAGCCGGTGCACTGGACAATGAGCACTATGCGGACGTGTCTATCACCAATGGCAAGATCGCAAACTCCACTATCGAGAAAGCGAAGCTGGTTGCAGCTGTTCAGACTACTCTTACCAACGCGGATACCCAGTACGGCACCCGCAACGGTAACTTTGAGAGTGCGATCGGCGGCTCTTTTGACTCTGACAGCGATGCAGCAATCGCGGCCCAGACAAACTACGCAACCAACACCACAATCACTGGCCAGCTTTCACAGCTTGATAGCCGCATGAAGTTGGACAATGACGACAACGCATTGCGCGTGGTTTCTGCGTCTCACAGCGGCGGCGCTCAGAACATCGGCTCAGCGGTTAAGTCTGGTCGCACTCTGACTGCGGTTAAGATCTTGCCGGTTACCGTTGCAAATGGCGCTGACGCTACCATGTCTATCGGCATCTCTGGCGATGCTAGCAAGTACGTTTCCGTTGCTGACATTGACCTGTATGAGTCAACTGTTCAGGTTATCCAACTGGCGCACACTCTTGGCAGTGATGAGCAGCTTATCGCCACTGTAACGCAGGGCACTGCAACTCAAGGAACGTTCACCGTGGTTGTTGAGCACGGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a8c57d10a302ba58554f666ce21b77fea8e32a18f41436f83d046e8f4c38bdc6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6969
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank