Protein
View in Explore- Genbank accession
- AUR89485.1 [GenBank]
- Protein name
- hypothetical protein
- RBP type
-
TSPTFTF
- Protein sequence
-
MATKLFSVEGVGPKVELGKDGHVIDGQNAAYVKVTDKDDTLLPVKGGDATASDEFVTQSQLDAVEAKTGGYLSYSYDASSGISQLSGQGSGDAGAIQYMDTFKVTTGGSFLGSTAEAGDFVIALTAGADVSDNTGSNTDWLLDTRRTAGDLADDTTLEASGGQIQIKDGGVSSAKLAADAVNSGSLVADDVIDSEHIAAGALDNEHYADVSITNGKIANSTIEKAKLVAAVQTTLTNADTQYGTRNGNFESAIGGSFDSDSDAAIAAQTNYATNTTITGQLSQLDSRMKLDNDDNALRVVSASHSGGAQNIGSAVKSGRTLTAVKILPVTVANGADATMSIGISGDASKYVSVADIDLYESTVQVIQLAHTLGSDEQLIATVTQGTATQGTFTVVVEHG
- Physico‐chemical
properties -
protein length: 399 AA molecular weight: 40687,89340 Da isoelectric point: 4,25391 aromaticity: 0,04762 hydropathy: -0,13008
Tail Spike Domain Segmentation
Segmented into three structural domains: N-terminal, central, and C-terminal.
Domain layout
AUR89485.1
1
399 aa
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 250 | 250 | 0,7895 |
| Central domain | 251 | 388 | 139 | 0,0455 |
| C-terminal | 389 | 399 | 10 | 0,9978 |
Note: Constraints were applied during segmentation.
Fixed 45 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Fixed 45 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
N-terminal
Central domain
C-terminal
View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.
Taxonomy
Coding sequence (CDS)
Genbank protein accession
AUR89485.1
[NCBI]
Genbank nucleotide accession
MG592498
[NCBI]
CDS location
range 36158 -> 37357
strand -
strand -
CDS
ATGGCTACTAAATTATTCAGTGTTGAGGGTGTAGGCCCTAAAGTTGAACTAGGTAAAGACGGTCACGTCATTGACGGTCAGAATGCGGCATACGTCAAAGTAACTGACAAAGATGACACGCTTCTTCCTGTTAAAGGCGGCGATGCAACTGCCTCTGATGAGTTCGTGACACAGTCGCAGCTTGACGCGGTAGAGGCTAAGACTGGTGGTTACCTTTCTTACAGCTACGATGCATCAAGCGGCATCTCTCAGCTATCAGGTCAAGGCTCTGGTGATGCTGGTGCAATTCAGTACATGGACACCTTCAAGGTAACCACTGGCGGCTCATTCCTTGGCTCAACTGCCGAGGCTGGCGACTTCGTTATCGCATTGACTGCTGGCGCTGACGTATCAGACAACACCGGATCAAACACCGATTGGTTGCTTGACACTCGCCGCACTGCCGGTGATTTAGCTGATGACACCACGCTTGAAGCGTCTGGCGGTCAGATTCAGATTAAGGATGGCGGCGTAAGCTCTGCAAAACTTGCTGCTGACGCTGTGAACTCCGGCTCTTTGGTTGCTGATGACGTCATCGACTCTGAGCACATCGCAGCCGGTGCACTGGACAATGAGCACTATGCGGACGTGTCTATCACCAATGGCAAGATCGCAAACTCCACTATCGAGAAAGCGAAGCTGGTTGCAGCTGTTCAGACTACTCTTACCAACGCGGATACCCAGTACGGCACCCGCAACGGTAACTTTGAGAGTGCGATCGGCGGCTCTTTTGACTCTGACAGCGATGCAGCAATCGCGGCCCAGACAAACTACGCAACCAACACCACAATCACTGGCCAGCTTTCACAGCTTGATAGCCGCATGAAGTTGGACAATGACGACAACGCATTGCGCGTGGTTTCTGCGTCTCACAGCGGCGGCGCTCAGAACATCGGCTCAGCGGTTAAGTCTGGTCGCACTCTGACTGCGGTTAAGATCTTGCCGGTTACCGTTGCAAATGGCGCTGACGCTACCATGTCTATCGGCATCTCTGGCGATGCTAGCAAGTACGTTTCCGTTGCTGACATTGACCTGTATGAGTCAACTGTTCAGGTTATCCAACTGGCGCACACTCTTGGCAGTGATGAGCAGCTTATCGCCACTGTAACGCAGGGCACTGCAACTCAAGGAACGTTCACCGTGGTTGTTGAGCACGGCTAA
Genome Context
Tertiary structure
Literature
| Title | Authors | Date | PMID | Source |
|---|---|---|---|---|
| A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria | Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. | 2018-01-24 | — | GenBank |