Protein

View in Explore
Genbank accession
XHB23492.1 [GenBank]
Protein name
hinge connector of long tail fiber protein distal connector
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,79
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MADLKAGSTVGGNPIWHAGTFPLVPAGNSLTYRGVKVYTEIDKPQADDNDFVSKSRGGTYAGEVKIAYGAAGKLSMGPLANVGIRAGGSNGEVLIIGGNSTIQLRGGGTEDSSGIVEIAKNGNLTAQTGRITANVFTSKQQPSGVDDLTRKDYVDGLINTVSNVANAAVKKAGDTMTGVLRANAGVVIVNKATSGEYAPRLDQVISRGVTIDFGTY
Physico‐chemical
properties
protein length:216 AA
molecular weight: 22178,59360 Da
isoelectric point:8,75141
aromaticity:0,05556
hydropathy:-0,14583

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XHB23492.1
1 216
Domain Start End Length (AA) Confidence
N-terminal 1 107 107 0,4420
Central domain 108 205 99 0,1641
C-terminal 206 216 10 0,8882
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-107
Central
108-205
C-terminal
206-216

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_Kpn529046-KEN39
[NCBI] 		3142667 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella sp.
[NCBI] 		576 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XHB23492.1 [NCBI]
Genbank nucleotide accession
PP723046 [NCBI]
CDS location
range 57176 -> 57826
strand +
CDS
ATGGCCGATTTAAAAGCAGGTTCAACAGTTGGTGGAAATCCTATTTGGCACGCAGGTACTTTTCCTCTTGTGCCGGCAGGAAACTCCCTAACTTATAGAGGTGTAAAGGTTTATACTGAGATAGATAAACCTCAAGCAGATGATAACGACTTTGTGTCTAAATCCAGAGGTGGTACATATGCAGGCGAAGTAAAAATAGCATATGGAGCTGCTGGTAAACTGAGCATGGGACCATTAGCGAATGTTGGTATTAGAGCTGGTGGTAGTAATGGTGAAGTTCTTATCATCGGAGGGAATTCAACAATTCAATTGCGCGGCGGCGGAACGGAAGATTCCAGCGGCATAGTTGAAATTGCTAAAAATGGTAACTTAACTGCACAGACTGGTAGAATTACCGCTAACGTATTTACTTCTAAACAACAACCATCTGGTGTAGACGATTTAACTCGTAAAGATTATGTTGATGGGCTAATAAATACTGTTAGCAACGTAGCTAACGCCGCAGTCAAGAAAGCTGGTGATACTATGACCGGTGTACTTAGGGCTAACGCTGGCGTAGTTATAGTAAATAAAGCAACATCCGGTGAATATGCTCCTAGATTAGATCAGGTTATTTCACGCGGGGTAACAATAGATTTTGGCACATACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
997646c00216166aeebe30b0b823dcc6c507e4e702d93f24a852edba819e5126
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7811
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequences of Five Klebsiella Phages That Belong to the Genus Jiaodavirus Burke,K.A., Peters,T.L., Kirillina,O.A., Urick,C.D., Mzhavia,N., Musila,L., Nikolich,M.P. and Filippov,A.A. 2024-12-12 — GenBank