Phage RBP Database

UniProt accession

A0A482IDT1 [UniProt]

Protein name

RNA ligase and tail fiber protein attachment catalyst

RBP type

TF

Evidence UniProt/TrEMBL

Probability 1,00

Protein sequence

MYLNLQMMRDALGHDETVRFKEETVDGREYVIVSYMIANDDLWRRSFGAEARGITFDKVTGECVSRPFHKFFNVGEKEFTQPDVLKNTVWTAYPKIDGSMITPVMVNGKVRLKTKKSFYSDVAREAQANLDPFTEGQMAAFLISGWTPIYEYTSPTTKIVVQHDKPAFKLLAGRSTQEGHYLTPTDLALNDTAIEPEFHMADINELLYIARDLEGVEGWVLVDHQDGYNRVKIKTEWYNRLHRVLDLRVRDVVEWIRDEKLDDMMPNLISMGVDTDVIRDIENRVVNAISDAVTHVKTVVLGASGLPLKEAVQFIEKHGGIYVKACHRTWRTGCIEPQMELIVRLYFQYHLQDYELTSIGNPNFGGKDG

Physico‐chemical properties

protein length:	369 AA
molecular weight:	42276,70290 Da
isoelectric point:	5,52898
aromaticity:	0,10027
hydropathy:	-0,32547

Domain architecture

A0A482IDT1

1 369 aa

STR 50–238 · RBD 239–350 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR019039
STR

IPR019039

IPR019039
STR

IPR019039 G3DSA:1.10.3550.20

G3DSA:1.10.3550.20
RBD

G3DSA:1.10.3550.20

A0A482IDT1

1369 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR019039	STR	DC_0813	50	238	InterPro cluster	T4 RNA ligase 1-like, N-terminal	Central	Low	Positional only	16 proteins / 16 hits
IPR019039	STR	DC_0813	50	235	InterPro cluster	T4 RNA ligase 1-like, N-terminal	Central	Low	Positional only	16 proteins / 16 hits
G3DSA:1.10.3550.20	RBD	G3DSA:1.10.3550.20	235	350	Merged direct domain	G3DSA:1.10.3550.20	C-terminal	Low	Positional only	9 proteins / 9 hits
G3DSA:1.10.3550.20	RBD	G3DSA:1.10.3550.20	236	350	Merged direct domain	G3DSA:1.10.3550.20	C-terminal	Low	Positional only	9 proteins / 9 hits

Proteins with similar domain architecture

Phage

Stenotrophomonas phage YB07 [NCBI] · taxon 2555548

Uroviricota Caudoviricetes Menderavirus

Host

Stenotrophomonas maltophilia [NCBI] · taxon 40324

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Lysobacterales

Genbank protein accession

QBP06373.1 [NCBI]

Genbank nucleotide accession

MK580972 [NCBI]

CDS location

range 117448 -> 118557
strand +

CDS

ATGTATCTGAATCTGCAAATGATGCGAGACGCATTGGGTCACGACGAGACCGTGCGTTTCAAGGAAGAGACCGTTGACGGTCGAGAGTACGTGATCGTGTCGTACATGATCGCAAACGATGATCTGTGGCGCCGATCTTTCGGCGCGGAAGCTCGCGGCATTACCTTCGACAAGGTGACCGGCGAGTGTGTCAGCCGTCCGTTCCACAAGTTCTTCAACGTCGGCGAGAAGGAGTTCACCCAGCCGGATGTTCTGAAGAACACTGTCTGGACCGCATACCCGAAGATCGATGGATCCATGATCACTCCGGTGATGGTGAACGGCAAGGTGCGTCTCAAGACCAAGAAGTCCTTCTACTCGGATGTGGCACGTGAGGCGCAGGCAAACCTGGACCCGTTCACTGAGGGTCAGATGGCAGCCTTCCTGATCTCCGGCTGGACTCCGATCTACGAGTACACGTCTCCGACCACCAAGATCGTGGTACAGCATGACAAGCCGGCGTTCAAGCTTCTGGCTGGGCGTTCCACTCAGGAAGGTCATTATCTGACGCCAACCGATCTCGCGCTGAATGACACTGCGATTGAGCCTGAGTTCCACATGGCAGACATCAACGAGCTGCTGTATATCGCACGTGATCTGGAAGGTGTCGAGGGTTGGGTGCTGGTCGATCACCAGGATGGTTACAATCGTGTCAAGATCAAGACCGAGTGGTATAACCGCTTGCATCGCGTCCTGGACCTCCGCGTTCGTGACGTGGTGGAATGGATCCGCGACGAGAAGCTGGACGATATGATGCCTAACCTGATCAGCATGGGAGTCGACACGGACGTGATCCGTGACATCGAGAACCGTGTGGTCAACGCGATCAGTGATGCAGTCACTCACGTGAAGACGGTGGTGCTTGGCGCATCCGGTCTGCCCCTGAAGGAAGCGGTACAGTTCATCGAGAAGCACGGCGGCATCTACGTCAAGGCTTGTCATCGCACCTGGCGTACTGGTTGCATTGAGCCGCAGATGGAATTGATCGTCCGCCTGTACTTCCAGTATCACCTTCAGGACTACGAACTGACATCAATCGGCAACCCCAACTTCGGAGGAAAGGATGGCTAA

	Description	Category	Evidence (source)
GO:0016874	ligase activity	Molecular Function	IEA:UniProtKB-KW (UniProt)

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Gene Ontology

Tertiary structure

Predicted Aligned Error (PAE)