Protein

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UniProt accession
A0A482IDT1 [UniProt]
Protein name
RNA ligase and tail fiber protein attachment catalyst
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MYLNLQMMRDALGHDETVRFKEETVDGREYVIVSYMIANDDLWRRSFGAEARGITFDKVTGECVSRPFHKFFNVGEKEFTQPDVLKNTVWTAYPKIDGSMITPVMVNGKVRLKTKKSFYSDVAREAQANLDPFTEGQMAAFLISGWTPIYEYTSPTTKIVVQHDKPAFKLLAGRSTQEGHYLTPTDLALNDTAIEPEFHMADINELLYIARDLEGVEGWVLVDHQDGYNRVKIKTEWYNRLHRVLDLRVRDVVEWIRDEKLDDMMPNLISMGVDTDVIRDIENRVVNAISDAVTHVKTVVLGASGLPLKEAVQFIEKHGGIYVKACHRTWRTGCIEPQMELIVRLYFQYHLQDYELTSIGNPNFGGKDG
Physico‐chemical
properties
protein length:369 AA
molecular weight: 42276,70290 Da
isoelectric point:5,52898
aromaticity:0,10027
hydropathy:-0,32547

Domains

Domains [InterPro]
IPR019039
STR
50–238
IPR019039
IPR019039
STR
50–235
IPR019039 G3DSA:1.10.3550.20
G3DSA:1.10.3550.20
RBD
236–350
G3DSA:1.10.3550.20
A0A482IDT1
1 369
Architecture
STR
RBD
STR 50-238 | RBD 239-350 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage YB07
[NCBI] 		2555548 Uroviricota > Caudoviricetes > Menderavirus >
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBP06373.1 [NCBI]
Genbank nucleotide accession
MK580972 [NCBI]
CDS location
range 117448 -> 118557
strand +
CDS
ATGTATCTGAATCTGCAAATGATGCGAGACGCATTGGGTCACGACGAGACCGTGCGTTTCAAGGAAGAGACCGTTGACGGTCGAGAGTACGTGATCGTGTCGTACATGATCGCAAACGATGATCTGTGGCGCCGATCTTTCGGCGCGGAAGCTCGCGGCATTACCTTCGACAAGGTGACCGGCGAGTGTGTCAGCCGTCCGTTCCACAAGTTCTTCAACGTCGGCGAGAAGGAGTTCACCCAGCCGGATGTTCTGAAGAACACTGTCTGGACCGCATACCCGAAGATCGATGGATCCATGATCACTCCGGTGATGGTGAACGGCAAGGTGCGTCTCAAGACCAAGAAGTCCTTCTACTCGGATGTGGCACGTGAGGCGCAGGCAAACCTGGACCCGTTCACTGAGGGTCAGATGGCAGCCTTCCTGATCTCCGGCTGGACTCCGATCTACGAGTACACGTCTCCGACCACCAAGATCGTGGTACAGCATGACAAGCCGGCGTTCAAGCTTCTGGCTGGGCGTTCCACTCAGGAAGGTCATTATCTGACGCCAACCGATCTCGCGCTGAATGACACTGCGATTGAGCCTGAGTTCCACATGGCAGACATCAACGAGCTGCTGTATATCGCACGTGATCTGGAAGGTGTCGAGGGTTGGGTGCTGGTCGATCACCAGGATGGTTACAATCGTGTCAAGATCAAGACCGAGTGGTATAACCGCTTGCATCGCGTCCTGGACCTCCGCGTTCGTGACGTGGTGGAATGGATCCGCGACGAGAAGCTGGACGATATGATGCCTAACCTGATCAGCATGGGAGTCGACACGGACGTGATCCGTGACATCGAGAACCGTGTGGTCAACGCGATCAGTGATGCAGTCACTCACGTGAAGACGGTGGTGCTTGGCGCATCCGGTCTGCCCCTGAAGGAAGCGGTACAGTTCATCGAGAAGCACGGCGGCATCTACGTCAAGGCTTGTCATCGCACCTGGCGTACTGGTTGCATTGAGCCGCAGATGGAATTGATCGTCCGCCTGTACTTCCAGTATCACCTTCAGGACTACGAACTGACATCAATCGGCAACCCCAACTTCGGAGGAAAGGATGGCTAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0016874 ligase activity Molecular Function IEA:UniProtKB-KW (UniProt)

Tertiary structure

PDB ID
6a80f478b24e509be931e93b3933e933a2ab1c12561e328d3647bd54fba02825
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9086
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50