Phage RBP Database

Genbank accession

QCQ57225.1 [GenBank]

Protein name

tail fiber protein host specificity

RBP type

TF

Evidence GenBank

Probability 1,00

TF

Evidence Phold

Probability 1,00

TF

Evidence RBPdetect

Probability 0,84

TSP

Evidence RBPdetect2

Probability 0,68

Seq2Symm

I confidence 0,086

I	0,086
C1	0,060
C3	0,014

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MAVVGVPGWIGSSSVNETGQRWMSQAAGQLRLGVPCWMSQFAGRSREIIHTVTANHNFNGQWFRDRCFEAGGAPIVFNIVGDIVSYSKDVPLFFMYGDTPNEYVVLNIHGGVHMWGRGGNGGYTHSGGDGNGTQGGHVIQNDIGGRLRIWNYGVIAAGGGGGGGIAYRPHSGANWQDIGGGGGRPFGGAGGGGYSGGAASYEGPGGGYDYGNAHSGAGGNAGAAGQNAWSDGGKVLKVGVGGASGHAVFGSSPTWGAVGTIYGPRV

Physico‐chemical properties

protein length:	266 AA
molecular weight:	26891,22870 Da
isoelectric point:	7,86490
aromaticity:	0,10902
hydropathy:	-0,21654

Domain architecture

QCQ57225.1

1 266 aa

ATT 1–42 · RBD 47–266

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR048291
ATT

IPR048291 IPR007932

QCQ57225.1

1266 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_2135
STR

DC_2135

QCQ57225.1

1266 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR048291	ATT	DC_0779	1	42	InterPro cluster	Phage tail fibre adhesin Gp38, N-terminal domain	N-terminal	High	Text match	530 proteins / 530 hits
IPR007932	RBD	DC_0283	47	266	InterPro cluster	Receptor-recognising protein Gp38	Central	High	Text match	553 proteins / 553 hits

Proteins with similar domain architecture

Phage

Escherichia phage EcNP1 [NCBI] · taxon 2576882

Uroviricota Caudoviricetes Pantevenvirales Tevenvirinae Tequatrovirus

Host

Escherichia coli [NCBI] · taxon 562

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Genbank protein accession

QCQ57225.1 [NCBI]

Genbank nucleotide accession

MK886800.1 [NCBI]

CDS location

range 135053 -> 135853
strand +

CDS

ATGGCAGTAGTTGGTGTTCCCGGCTGGATTGGAAGTTCATCCGTAAATGAAACAGGACAACGATGGATGAGTCAAGCGGCTGGTCAATTAAGATTGGGTGTTCCTTGCTGGATGAGCCAATTCGCCGGACGCTCAAGAGAGATTATTCATACCGTAACAGCAAACCATAACTTTAATGGTCAATGGTTCCGTGATAGGTGCTTTGAAGCTGGCGGTGCACCCATTGTATTCAATATTGTTGGTGATATCGTTTCTTATTCTAAAGATGTGCCACTTTTCTTTATGTATGGGGATACGCCTAATGAATATGTTGTTCTTAATATTCATGGTGGTGTTCATATGTGGGGTCGTGGTGGTAATGGTGGATACACTCACTCAGGAGGCGACGGTAACGGTACACAAGGCGGTCATGTTATTCAAAATGATATCGGTGGACGGCTTCGTATTTGGAACTACGGTGTTATAGCTGCTGGGGGTGGCGGCGGCGGTGGTATTGCATATCGTCCACACTCAGGGGCAAACTGGCAAGATATCGGTGGCGGCGGCGGTCGACCTTTCGGTGGTGCTGGCGGTGGCGGTTATTCCGGTGGTGCTGCTTCGTATGAAGGTCCGGGTGGTGGTTATGACTATGGTAACGCACACTCCGGCGCAGGTGGTAATGCTGGTGCTGCTGGTCAGAATGCATGGTCTGACGGCGGTAAAGTTCTTAAAGTTGGTGTTGGTGGTGCGTCTGGTCATGCAGTGTTTGGGTCTTCTCCAACTTGGGGTGCTGTTGGAACAATTTACGGACCAAGAGTATAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)