Phage RBP Database

Genbank accession

MN871511.1_CDS_[88377..91250] [GenBank]

Protein name

central tail fiber J

RBP type

TF

Evidence Phold

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,86

Protein sequence

MPSKITQALKDYLNNNDKVQLAHLVRIELPGDLASFAYYTDYSREIQYDGQEFVPGKVKNISDVKQSNRLSAHNVTIKITGASSEEVDRAVRSQQYLNKKISIWRVVLDNTTGEIIPYYDDGSTLLFFEGTITEVSIDENRSATSRGESTISWKCANEFYDLERVNGRLTDDEAHRGLIVDQDGDEVPSNAAKRFEYQTDLGFFHANKSVNILAKYQGLEQAYKLKKKSSGLFGIKKSYDLVEYWETVEKEVDMRFNLAAKNIPTIYGVQKTQGIPVFADTLLDDPSTVYVVYAFCEGEIDGFLDIWMEDKPLVCNDTNDADERACFGVKRGNGDTISVATPTQDPTAPSVHGQEYIVQDGLGQVSFWTFHGKRDQTACSKLVDIAADGNFYLQNNGPTPMGPEYWDNRYRLLDTAYVVAEFKITDQRTEIPTIYAEIQGRKVAVYDENGLVRDDRTSTNPAWQMLDYLNSPIFGASVGMDRIDLNTFVEVANLLDTVDNTYELSWVPFWRYIGWEDNTNEANKAILQTNPLLNGETSLFKNMKSMLEQAESSLNIIEGKYALTVESLKDPVADLTEADLVGGRLQVSDITSKEKYNTVQADIRDPGIGWESNDIIFFNADFKAEDNQLEKKANISFPHVTNYYCARALAERVLKKSRYNREVSITVPYKYVDLPINSPVTLTYERFGWDKKQFLIRETVWQSTGKVKLKLREYEDGVFINSPQSDIGDSQIPEIGTKVLPPRDLNYRPSIPGDPEGVNGYLRWLPSFSPDVTYYAINYTGVASTITVNASSTDEPSTYIELPIDTITEDRIYTFEVRAVAGNKGLSSSPAILSLQLGPDGTKNLTMVTGFDLVNNITGDETVWKGAEVSLQWNPIFEEDFMDNIYYNLEFWDGDFDTGDLIRALEIRNAYAYIYDLPANKSDYLAAKGTKGMFRQLGVRIRAESDDGAKSVGWTKI

Physico‐chemical properties

protein length:	957 AA
molecular weight:	107954,32650 Da
isoelectric point:	4,68429
aromaticity:	0,10867
hydropathy:	-0,44222

Domain architecture

MN871511.1_CDS_[88377..91250]

1 957 aa

ATT 7–141 · ATT 569–674 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

PF09931
ATT

PF09931 IPR032876

MN871511.1_CDS_[88377..91250]

1957 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0187
STR

DC_0187

MN871511.1_CDS_[88377..91250]

1957 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
PF09931	ATT	DC_0354	7	141	InterPro cluster	PF09931	N-terminal	High	Text match	7 proteins / 7 hits
IPR032876	ATT	DC_0307	569	674	InterPro cluster	Tip attachment protein J	Central	Medium	Text match	1111 proteins / 1112 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

MN871511.1_CDS_[88377..91250]

1 957 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	308	308	0,9531
Central domain	309	544	237	0,1956
C-terminal	545	957	412	0,0147

Note: Constraints were applied during segmentation.
Fixed 14 C-terminal predictions appearing before Central domain

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Vibrio phage vspsw1 [NCBI] · taxon 2698976

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host No host information

Genbank protein accession

MN871511.1_CDS_[88377..91250] [NCBI]

Genbank nucleotide accession

MN871511.1 [NCBI]

CDS location

range 88377 -> 91250
strand +

CDS

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)