Protein

View in Explore
Genbank accession
QOI71195.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,54
TF
Evidence RBPdetect2
Probability 0,89
TF
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MSIRFNHASNTVTGTDVIKLVVEGGTPTAPRPFRIDSSSVIMPNKQLPSGEAGALVFDIVSKTLKYHNGISWVELLSQDDILAPIQISLTDIYNQLANRVSTVTYSTSSVPSASVSGTNLNIIFPSSGGGGGTDIPGLFTSSPPGSIMQYSLSSGQSVASIREQMSGVSGGQNGRNGTASAPYVTKTGWCFADGSYWTWNGESGSVTKVVPNLNQNAYLKGITTTGLTKTDAVISGSGSIGNTSISFPQHYHGTGMMVGLSGDWGDDGYFISNKTWNDGIQYQGVQITGDLQRRTTGPVNGSDARTALSTSLAIFTGSDTTSHTHSLNSVDVAHFNVAVVYNIAEPSSALNQNAGDRRYVLKSGDTMTGSLTIANSAAIQANDTNLVLWFRNASGGERAAIYHASNTNTLRLRTAGGSEMSLNNVGLLNVSSITTGSITGSSLNISGTATTGPLNVNGQITATGDIWAFSDERLKENIKPIENAVDIIKSIRGVTGNFIGDERTRSMVIAQEVQKNFPCAVTEDVSGFLKVNYDALIPLLLNAVSTMSEEIASLRSIIK
Physico‐chemical
properties
protein length:559 AA
molecular weight: 58839,86870 Da
isoelectric point:5,78578
aromaticity:0,06619
hydropathy:-0,11431

Domains

Domains [InterPro]
DC_0139
STR
5–559
DC_0139
IPR030392
CHP
470–521
IPR030392
IPR030392
CHP
470–558
IPR030392
QOI71195.1
1 559
Architecture
STR
STR 5-559
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QOI71195.1
1 559
Domain Start End Length (AA) Confidence
N-terminal 1 207 207 0,5933
Central domain 208 406 200 0,3655
C-terminal 407 559 152 0,9191
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-207
Central
208-406
C-terminal
407-559

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEa_SNUABM_12
[NCBI] 		2768773 Uroviricota > Caudoviricetes > Eneladusvirus >
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QOI71195.1 [NCBI]
Genbank nucleotide accession
MT939486.1 [NCBI]
CDS location
range 185607 -> 187286
strand +
CDS
ATGAGTATAAGATTTAATCATGCCAGTAATACAGTTACTGGTACAGATGTAATCAAATTAGTGGTTGAAGGTGGGACACCAACTGCACCAAGACCATTTAGAATTGATTCATCTTCAGTTATTATGCCTAACAAACAATTACCTTCTGGTGAAGCAGGGGCATTAGTTTTTGATATTGTATCAAAAACATTAAAATATCATAATGGTATTTCATGGGTAGAGTTATTATCACAAGATGATATTCTAGCACCTATACAAATATCATTAACGGACATTTATAACCAATTAGCGAACCGTGTAAGTACTGTAACATATAGTACCAGTTCAGTACCTTCTGCGTCCGTAAGTGGAACAAACTTAAATATCATATTTCCATCATCAGGTGGAGGTGGAGGCACAGACATTCCTGGATTATTCACTTCTTCTCCACCAGGTTCTATCATGCAATATTCTTTGTCATCTGGTCAATCTGTTGCATCTATCAGAGAACAAATGAGTGGTGTTAGTGGTGGACAAAATGGTAGAAATGGTACAGCTTCAGCTCCATATGTAACAAAAACTGGATGGTGTTTTGCAGATGGTTCTTATTGGACATGGAATGGAGAAAGTGGTTCAGTAACCAAAGTTGTTCCAAATTTAAACCAAAATGCATATTTAAAAGGTATAACCACAACTGGTCTTACTAAGACAGATGCAGTAATTTCAGGTTCAGGTTCAATAGGAAATACGTCAATATCTTTCCCACAACATTATCATGGTACTGGTATGATGGTTGGATTATCTGGTGATTGGGGTGATGATGGATATTTCATTAGTAATAAAACATGGAATGATGGAATACAATATCAGGGAGTACAGATAACAGGTGATTTACAACGTAGAACAACTGGTCCAGTTAACGGTTCAGATGCTCGAACAGCATTAAGCACTTCTTTAGCAATATTCACTGGTTCAGATACTACTTCTCATACTCACAGCTTAAATAGTGTTGACGTAGCTCACTTTAATGTTGCTGTGGTATATAATATTGCAGAACCAAGCTCAGCACTTAATCAAAATGCTGGTGATCGCCGTTATGTATTAAAATCTGGTGATACTATGACTGGTTCATTGACTATCGCTAATAGTGCTGCAATTCAAGCAAATGATACAAATCTAGTACTATGGTTTAGAAATGCATCTGGTGGTGAACGTGCTGCAATATATCATGCATCTAATACTAATACTCTTAGATTGCGTACTGCTGGTGGTTCTGAAATGTCATTAAATAATGTAGGACTATTAAATGTTTCATCAATTACTACTGGTTCAATTACAGGTTCATCATTGAACATATCTGGTACAGCAACAACTGGCCCATTAAATGTTAATGGACAAATAACAGCCACTGGTGATATTTGGGCATTCTCTGATGAAAGATTGAAAGAAAATATTAAACCTATTGAAAATGCCGTAGATATAATTAAAAGTATTCGTGGTGTAACTGGTAATTTTATTGGAGATGAACGTACACGTTCAATGGTTATTGCTCAAGAAGTCCAGAAGAACTTCCCTTGTGCTGTAACTGAAGATGTATCAGGATTCTTAAAAGTTAATTATGATGCCCTTATTCCATTGTTGTTAAATGCAGTCTCTACTATGAGTGAAGAAATTGCAAGTTTAAGGAGCATAATTAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c05f688bc5a2757a04b375bbaaa1e91050cb00bc1cf811c5609a8a0a1b001665
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5905
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage pEa_SNUABM_12 Kim,S.G., Lee,S.B. and Park,S.C. 2021-01-07 — GenBank