Protein

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Genbank accession
YP_008239741.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,65
Protein sequence
MALVIHYTRNEDGTFDVKRYRDNPINFAVGHIPDGVPFRVFIDEIGEDNDVTEDFEALKEDATFHIVESAGGGAIKGVMKIFSVILKPLAKLLSPSVKGASLNLANSQADSPNNSLTDRNNKARPYERSYDICGTVQTIPNNLMTTYKVFNAAGKIVEYGYYDAGRGHLDIHPEDITDGDTRVSDITGTSVAVYAPYTSPNNTSTPQVMVGDPIEQGLYITIESNEIDGVVLKAPNGLGISFSYMSGYPSLSGNIGTIYDPTGGSDFSGVLVPDDTFSLVSAWTNTDVDLSGGGYQVVSVSEGTVTFIVPGGLVGRWQEISPGSFFRGDGEASLQPNNTYEKTLTDWVSINRTEVERIVANIAAANGMYKDNGKSKTLAFVTAEIQYQLLDENSAPYGPIYTAQGTVTGRTPDYNGVTIYADLPVASRVRVRARRVTDLDFNFEGSVVDEITYVNLYGQTRDNTPHYGNRTTVHSMRKQTPRAAEVKQPQLRMIATEMVYKYLGNGVFEDTMTPNTQAVQSLIRLARDPDVGGLNLTARNMDKLLAVQKEIEDYFGDKQAGEFCYTFDDYKTTMQDIVSTIADAIFCTPYRKGADILLDFERPRMGPEMVFTHRSKAGTSEKWTRTFNDSQVFDSLKFSYIDPKTNVKETITIPETGGLKTETYDSKGIRNYKQAFWAASRRHQKNILKKISVSFTATEEGIFALPNRAVSVVKGSRMATYDGYVTAVNGLTVELSQPVKFTSGDDHSLILKLRDGGVQSVNVVPGAHDRQVIMTSVPQEAIYAGNSALKTEFSFGNEARHNAQMILVSTVDPGDDRTVKITGFNYDKDFYKFDNVPPFGRAFSNGFDNGFN
Physico‐chemical
properties
protein length:852 AA
molecular weight: 93792,72960 Da
isoelectric point:5,14969
aromaticity:0,09859
hydropathy:-0,36009

Domains

Domains [InterPro]
DC_0118
STR
1–686
DC_0118 DC_0808
NF040662
Unmapped
352–832
NF040662
YP_008239741.1
1 852
Architecture
STR
RBD
STR 1-686 | RBD 703-846 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_008239741.1
1 852
Domain Start End Length (AA) Confidence
N-terminal 1 231 231 0,9736
Central domain 232 430 200 0,5982
C-terminal 431 852 421 0,1637
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-231
Central
232-430
C-terminal
431-852

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Jersey
[NCBI] 		1340534 Uroviricota > Caudoviricetes > Sarkviridae > Jerseyvirus > Jerseyvirus jersey
Host Salmonella
[NCBI] 		590 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_008239741.1 [NCBI]
Genbank nucleotide accession
NC_021777 [NCBI]
CDS location
range 21537 -> 24095
strand +
CDS
TTGGCGCTAGTAATCCACTACACACGAAATGAAGACGGCACGTTCGATGTCAAGCGCTATCGCGATAACCCGATTAACTTCGCCGTCGGCCACATCCCGGATGGGGTTCCGTTTCGCGTTTTCATTGATGAAATCGGAGAAGATAACGATGTAACAGAAGACTTCGAAGCGCTAAAAGAAGACGCGACTTTTCATATTGTTGAATCCGCTGGTGGTGGCGCTATTAAAGGGGTCATGAAGATTTTTAGCGTTATTCTTAAACCGTTAGCGAAGCTCTTGTCGCCGTCCGTGAAAGGTGCGTCCTTGAACCTTGCGAACTCACAGGCGGATTCCCCAAACAACAGTCTCACTGACCGTAACAACAAGGCACGCCCGTATGAGCGCAGCTACGATATCTGCGGGACGGTGCAAACCATCCCCAATAACCTTATGACTACTTATAAAGTGTTTAACGCTGCCGGTAAAATTGTAGAGTATGGCTACTACGACGCGGGTCGGGGGCACCTCGATATCCACCCTGAGGATATAACTGATGGCGATACGCGCGTTTCTGACATCACCGGCACGTCAGTCGCCGTGTACGCGCCGTATACGTCGCCTAATAATACATCCACACCGCAGGTCATGGTCGGCGACCCGATAGAACAAGGGCTGTACATCACCATAGAATCTAACGAAATAGACGGAGTGGTTCTTAAAGCGCCTAACGGCCTGGGCATTTCTTTCTCTTACATGTCCGGATACCCGTCCTTATCCGGTAACATCGGCACCATATACGACCCAACAGGTGGCTCGGATTTTTCGGGAGTACTGGTGCCTGATGACACGTTTTCACTGGTGTCCGCGTGGACAAATACAGACGTTGACCTGTCTGGCGGCGGGTATCAGGTAGTAAGCGTGTCCGAAGGGACTGTTACCTTTATTGTACCCGGTGGCCTCGTCGGCAGGTGGCAAGAAATAAGTCCCGGTTCGTTTTTCCGGGGTGATGGCGAGGCCTCGCTGCAACCAAACAACACGTATGAGAAAACCTTAACCGATTGGGTTTCAATAAACCGCACCGAGGTTGAGCGCATCGTGGCCAATATCGCCGCTGCGAACGGCATGTATAAAGACAACGGCAAATCGAAAACACTGGCGTTTGTCACCGCTGAGATACAGTACCAGTTACTTGATGAAAACAGCGCCCCTTATGGGCCTATATATACCGCGCAAGGAACTGTGACTGGGCGCACCCCGGACTACAACGGAGTCACTATCTATGCCGACCTGCCGGTTGCATCCCGTGTAAGAGTTAGGGCTCGCAGGGTTACAGACCTCGACTTCAATTTTGAAGGGTCTGTAGTCGATGAAATAACGTATGTGAACCTGTACGGGCAGACAAGAGACAACACCCCACACTACGGCAACCGAACAACCGTACACTCGATGCGCAAGCAGACACCGCGTGCTGCTGAGGTTAAGCAACCACAGTTGCGTATGATCGCCACCGAAATGGTGTATAAATACCTTGGTAATGGTGTTTTCGAAGACACGATGACCCCTAATACCCAGGCCGTGCAGTCTCTTATCCGCCTGGCACGTGACCCTGATGTTGGAGGGTTAAACTTAACGGCGCGGAATATGGACAAGTTACTTGCCGTTCAGAAAGAGATTGAAGATTATTTCGGCGACAAGCAAGCGGGGGAATTTTGCTACACGTTTGATGACTATAAAACCACTATGCAGGACATAGTTAGTACTATAGCAGACGCTATATTCTGCACCCCATATCGGAAAGGGGCGGATATCCTTCTTGATTTTGAACGCCCTCGCATGGGTCCTGAGATGGTGTTCACCCACCGGAGCAAGGCCGGTACTTCTGAAAAGTGGACCAGAACATTTAACGATTCTCAAGTTTTTGACAGCCTTAAATTCTCGTACATAGACCCTAAAACAAACGTTAAAGAAACCATAACCATACCCGAAACCGGGGGCCTTAAAACGGAGACTTACGACTCAAAAGGAATCCGCAACTATAAGCAGGCTTTCTGGGCAGCGAGCCGCCGCCACCAGAAGAACATTTTAAAGAAAATTTCGGTGTCGTTTACCGCCACTGAAGAGGGTATCTTTGCTTTACCAAATCGTGCCGTTAGTGTGGTTAAGGGCTCCAGGATGGCTACCTACGACGGCTACGTAACCGCGGTAAACGGGCTCACCGTAGAACTGTCACAACCGGTTAAGTTCACCTCGGGAGATGACCATTCTTTGATTCTCAAGTTACGTGACGGCGGAGTGCAAAGTGTTAATGTAGTCCCTGGGGCGCACGACCGGCAGGTAATTATGACGTCGGTACCGCAAGAAGCCATTTACGCAGGTAATAGTGCTTTGAAAACTGAATTTTCATTCGGCAACGAAGCAAGGCATAATGCTCAGATGATTCTTGTTTCTACAGTAGACCCAGGGGATGACAGAACAGTCAAAATAACCGGGTTTAACTATGACAAGGATTTCTATAAGTTTGACAACGTGCCGCCTTTCGGTCGTGCGTTCTCCAACGGATTCGATAACGGTTTTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
93edc5370c1fd8798a178edd947d53b8809642b5f61b29e85850ebf8b2b7fe67
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8057
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50