Phage RBP Database

Genbank accession

QEG09205.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence Phold

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,91

TSP

Evidence RBPdetect2

Probability 0,99

Seq2Symm

C3 confidence 0,998

C3	0,998
C1	0,650
C7-C9	0,003

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MATESLNGFYGGSTAPIYIEDLIRAAEDAATRSENAANSFDQKYLGGKTTPPTTDNSGNTLIVGATYWDIDDKTLYYWDGNDWVTDAVGTVKDAVGLFISTNTFNYPVGHHIHFKEFFLNSGKGAGDWYKDGTTGTPSSYPSGVLPCKFYDAAGYGWSLVGDVVNYWQVGAVEGGDSQMAIQSAWNSGKIVAGLTGDFRFDSALYMPNGLKFLGTHACAHKKNFLGNGIVNTAFPNYGSDITLENFYLTHESNSTNNRGYMWQLFVDNLTLINPKVRNIAAYSAVGCWSFYHSGKGGYISNPDIDARDAGLFGDGMHFAYLEDFAMVGGKVFGGDDGIALFVPSIQGAQPGRDLPSKNVSIVGTKVSSKEANIIRLGCAGAAIELGDAPANCVWQNVHIDISCDNLDGESIGRNISITDPRTPANIVGTHKDIFIRVGNIPLVGNGGGINVVGNADITNAANATVRNFENVTIEGSKHYMDNNTTWLRAGGIEKLTLKGFDVERDFVASFQILDINGVGELVFDGVDLQSGLSGTTGTSCSIRNTEKVRFKNGCDWVGGGEFAFINYITNATLDSEIYIDASCALHGAQRLLSNTNGATVSYAMQRISGDLYDASAATITADAQNRAAGYIRLQDGTVL

Physico‐chemical properties

protein length:	639 AA
molecular weight:	68435,21990 Da
isoelectric point:	4,82861
aromaticity:	0,10642
hydropathy:	-0,15352

Domain architecture

QEG09205.1

1 639 aa

STR 173–487 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR011050
STR

IPR011050

QEG09205.1

1639 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_2093
STR

DC_2093

QEG09205.1

1639 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR011050	STR	IPR011050	173	487	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

QEG09205.1

1 639 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	177	177	0,9861
Central domain	178	598	422	0,9861
C-terminal	599	639	40	0,8357

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Vibrio phage Phriendly [NCBI] · taxon 2596675

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host

Vibrio natriegens [NCBI] · taxon 691

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Vibrionales

Genbank protein accession

QEG09205.1 [NCBI]

Genbank nucleotide accession

MN062185.1 [NCBI]

CDS location

range 36572 -> 38491
strand -

CDS

ATGGCTACTGAAAGTTTAAATGGTTTTTATGGAGGCAGCACGGCTCCTATTTATATTGAAGATTTAATTCGTGCAGCAGAAGATGCAGCCACTCGGTCAGAGAATGCTGCTAATTCATTTGACCAAAAGTACCTCGGTGGTAAAACAACACCACCTACTACAGATAACAGTGGTAACACTTTGATTGTTGGTGCAACATACTGGGATATTGATGACAAAACCCTATACTACTGGGACGGAAATGATTGGGTTACTGACGCTGTTGGTACGGTTAAAGATGCTGTTGGCTTATTTATCTCAACCAATACATTCAACTATCCTGTTGGTCACCACATACACTTTAAAGAATTCTTCTTGAACAGTGGTAAAGGTGCTGGGGATTGGTATAAAGATGGTACTACAGGAACACCATCATCATACCCTAGCGGAGTACTTCCTTGTAAGTTCTATGATGCTGCTGGCTATGGATGGTCTTTGGTTGGCGATGTAGTAAACTATTGGCAAGTCGGTGCTGTTGAAGGTGGTGATTCTCAAATGGCAATTCAGTCTGCATGGAACAGTGGAAAGATTGTTGCTGGACTTACAGGCGACTTTCGTTTTGACAGCGCGTTATATATGCCTAATGGATTGAAGTTTTTAGGTACACATGCGTGTGCGCATAAGAAGAACTTCCTTGGCAATGGTATCGTAAATACTGCATTCCCTAACTATGGTTCAGACATTACACTAGAAAACTTTTACCTAACGCACGAATCCAATAGCACTAATAATCGTGGCTACATGTGGCAGTTGTTTGTAGATAACCTAACACTCATTAATCCTAAAGTACGAAACATTGCTGCATACAGTGCAGTAGGTTGTTGGAGCTTCTATCACTCAGGGAAGGGAGGCTATATTTCTAATCCTGATATTGATGCACGAGATGCTGGTTTATTTGGGGATGGAATGCACTTTGCCTACCTTGAAGATTTTGCAATGGTTGGTGGTAAAGTGTTTGGTGGTGATGATGGTATAGCATTGTTTGTTCCATCTATCCAGGGTGCCCAACCCGGACGTGATTTACCTTCTAAGAATGTATCTATTGTAGGTACTAAGGTTAGCTCTAAAGAAGCTAACATTATCCGATTAGGTTGTGCTGGCGCTGCTATTGAGTTGGGGGATGCTCCTGCAAACTGTGTGTGGCAAAACGTACATATTGATATTTCATGTGATAATTTGGATGGAGAATCTATTGGTCGAAATATCTCCATAACTGACCCAAGAACTCCAGCTAACATTGTAGGTACCCATAAGGATATCTTTATCCGTGTTGGTAATATCCCCTTAGTAGGTAATGGTGGTGGTATCAATGTTGTAGGTAATGCAGATATTACAAATGCAGCTAATGCTACAGTACGCAACTTTGAGAATGTAACCATTGAGGGTTCTAAACATTACATGGATAACAATACTACATGGCTACGTGCCGGAGGTATTGAAAAACTAACTCTTAAAGGATTTGATGTAGAACGAGACTTTGTTGCTTCATTCCAGATTCTAGATATTAACGGTGTTGGTGAATTAGTCTTTGATGGTGTTGATTTACAATCCGGGTTATCAGGTACGACAGGAACTTCTTGTAGCATCCGCAACACTGAGAAGGTCAGATTCAAAAATGGTTGTGATTGGGTTGGTGGCGGAGAGTTCGCGTTTATCAATTACATCACTAACGCTACACTAGACAGTGAGATTTACATTGATGCTTCTTGTGCGTTACATGGTGCACAACGTCTACTAAGTAACACTAACGGAGCTACTGTTTCTTATGCGATGCAGCGTATCAGTGGTGACTTATATGATGCTAGTGCAGCCACAATAACAGCGGATGCTCAAAACAGAGCTGCTGGTTATATTAGACTACAAGATGGCACAGTGCTATAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)