Phage RBP Database

Genbank accession

WPH68639.1 [GenBank]

Protein name

tail spike protein with colonic acid degradation activity

RBP type

TF

Evidence Phold

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,91

TSP

Evidence RBPdetect2

Probability 0,97

Protein sequence

MATTPTTGDIPSNAAVDLKFNSEQFDRVMNSDDLTYTDRFGKKRITMKGVQELANGFQDTFTNLLGSPDGFKLIGGVKSFDTLRSTPVRTEGQRIFLKSYHENGTTGGGIFVGHIGTKLDDGGTVAQGVGFYWERADCTEISVEIFGGTPNNNTIDNSDFIIAADLVSFSKGVRLTGKGLNYSVGRSFTLATPNIKDIKISPTSSFTGDAPTFTCDQNTGELVLEDVDISDFKGRGSNCTKGNYTLVPTITFKGTCKFNGNGGGPTRTTVLPKTTTISAAADLTTTSVISVADTSKFIAGDYVLVNGVRYRILSVDSSSQITFYNTSSIPTIYNDGVNSSVSAGDVLEKVFVVNTASEAVIDVADSTIFKVGDAVWIGDSKCLISVINNSTQITLVNVNGVPTLQYGGTGTGRYTSGQYVTKDKNGKNGFTINTSSSIGWNINLKGNVEFNNNGWFGLFQWCNASGGTVFGGAKANNNGYIGVGLGYVKGGELSGFVTNNNGNNGLDLFETYSETTIHDCTSNNNGVDGIFVASSKTAPKLYANTCVGNKRIGMLANGRTVTPVGLTVLDNFCVGNDLYSICLTGIGGGIVGDCSVGGGMQGIRIEGKNGIANPKSITVRDCKFSSVSSESDIFANIGGYTNGGDQGSLHLNNNSYFGRTPKFSITNIDVDKSTFIPAGYSKPNGTDLSASAGTAIAVGVTFFKPHAPTVIDNSAEDFTVQIYTNSGLTTVGTVTTATRTAGVELSNGATSNGRIIGSPAYGTFSYNFTLSSPGTRYLHIKSKYGSSVIKLTWS

Physico‐chemical properties

protein length:	794 AA
molecular weight:	83606,05080 Da
isoelectric point:	6,15131
aromaticity:	0,09194
hydropathy:	-0,14547

Domain architecture

WPH68639.1

1 794 aa

STR 353–613 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR012334
STR

IPR012334

WPH68639.1

1794 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0282
STR

DC_0282 DC_1856

WPH68639.1

1794 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR012334	STR	IPR012334	353	613	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

WPH68639.1

1 794 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	157	157	0,9905
Central domain	158	706	550	0,9576
C-terminal	707	794	87	0,9394

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Stenotrophomonas phage BUCTxx100 [NCBI] · taxon 3092589

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host

Stenotrophomonas maltophilia [NCBI] · taxon 40324

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Lysobacterales

Genbank protein accession

WPH68639.1 [NCBI]

Genbank nucleotide accession

OR529409.1 [NCBI]

CDS location

range 70019 -> 72403
strand +

CDS

GTGGCTACAACTCCAACTACGGGTGACATCCCCAGCAATGCTGCGGTGGACCTCAAGTTTAACTCGGAACAATTCGACCGAGTAATGAATTCTGACGATCTGACTTATACGGATCGTTTTGGTAAAAAACGCATTACAATGAAAGGGGTTCAGGAACTCGCTAATGGCTTCCAGGATACTTTCACTAATCTGTTGGGTTCTCCCGACGGATTTAAATTAATCGGCGGAGTGAAATCTTTTGATACCCTGAGATCGACCCCAGTGAGAACCGAAGGCCAACGTATTTTCCTCAAGTCCTATCATGAAAATGGAACTACTGGCGGAGGGATCTTTGTTGGTCACATCGGGACCAAGTTAGATGATGGCGGTACTGTGGCCCAGGGCGTAGGGTTCTATTGGGAAAGGGCTGATTGCACGGAGATATCCGTAGAAATCTTTGGCGGTACACCTAACAATAACACGATTGATAATTCAGATTTCATCATTGCGGCGGATTTAGTTTCTTTTTCCAAGGGGGTTCGATTAACCGGGAAAGGGTTAAACTATAGTGTAGGGAGATCCTTTACACTGGCTACCCCTAACATAAAGGATATTAAAATATCCCCAACCTCCAGCTTTACAGGCGACGCTCCAACATTTACCTGCGATCAAAATACCGGAGAGTTGGTCTTAGAAGACGTTGATATTTCCGACTTCAAAGGCCGAGGGAGTAATTGCACAAAAGGGAACTATACTCTCGTCCCGACGATCACCTTTAAAGGAACTTGCAAATTCAATGGCAATGGCGGGGGTCCTACAAGAACAACTGTTTTACCTAAAACAACTACTATATCTGCGGCTGCTGACCTGACCACCACGTCTGTTATTTCTGTGGCGGACACCTCTAAATTTATAGCGGGTGATTACGTCCTGGTAAATGGGGTCAGATATCGTATTCTCTCCGTCGATTCTTCTTCCCAAATTACTTTTTATAACACATCTTCAATCCCCACTATTTACAATGACGGTGTCAACAGTTCCGTTTCAGCGGGCGATGTGCTGGAAAAGGTTTTTGTTGTGAACACGGCTTCAGAAGCAGTCATCGATGTCGCGGACAGCACTATATTTAAAGTCGGGGATGCCGTTTGGATAGGGGATAGCAAATGTTTAATTTCCGTCATCAATAATTCAACCCAGATAACTTTAGTGAACGTAAACGGCGTCCCCACTTTGCAATATGGAGGGACTGGAACGGGAAGGTATACTTCCGGTCAGTACGTCACTAAGGATAAAAACGGTAAAAACGGATTTACGATTAATACGTCGTCTTCGATTGGTTGGAATATCAATCTAAAAGGCAACGTCGAATTTAATAACAACGGATGGTTTGGGTTATTTCAGTGGTGTAATGCCTCTGGAGGAACAGTTTTTGGGGGAGCCAAAGCCAATAATAACGGATATATCGGCGTGGGCTTGGGCTACGTGAAGGGTGGGGAACTGAGCGGATTTGTAACCAACAATAATGGTAACAACGGTTTAGATCTGTTTGAAACTTACTCGGAGACGACTATTCATGATTGCACGTCCAATAATAACGGAGTTGACGGTATTTTCGTTGCAAGTTCTAAAACAGCACCCAAACTTTACGCTAACACGTGCGTGGGTAATAAAAGAATAGGGATGCTGGCCAATGGTAGAACCGTGACGCCGGTAGGACTCACTGTACTGGATAATTTCTGTGTCGGTAACGATTTATATTCCATCTGTTTAACTGGAATAGGAGGGGGGATCGTAGGCGATTGTTCTGTTGGCGGTGGGATGCAAGGCATCCGTATCGAGGGCAAGAACGGCATAGCCAACCCCAAATCAATAACGGTAAGGGATTGTAAATTCAGTTCTGTTTCGTCCGAATCCGATATCTTTGCCAATATTGGTGGATACACCAATGGCGGTGATCAGGGATCCTTACATCTCAATAACAACAGTTATTTTGGAAGGACGCCAAAATTTTCTATCACTAATATCGATGTGGATAAATCAACCTTTATCCCGGCTGGCTACTCTAAGCCTAACGGAACGGATTTAAGCGCATCGGCCGGGACGGCGATAGCGGTCGGCGTTACATTTTTTAAACCCCACGCTCCGACTGTTATAGACAATTCTGCCGAAGACTTCACCGTTCAAATTTATACCAATTCCGGGCTGACCACAGTGGGTACGGTAACTACTGCGACAAGAACGGCTGGAGTGGAACTTTCTAATGGGGCGACTAGTAACGGGCGGATAATAGGTTCGCCGGCTTATGGAACGTTCTCTTATAACTTCACGCTCAGCTCACCCGGGACAAGATATTTGCATATCAAATCTAAATACGGGTCTTCGGTTATCAAATTAACCTGGAGCTAG

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)