Protein

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Genbank accession
QXO06233.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MQFKKVDVLISENLTKEQLKEKVLTELNKISKESNPSISYIANIHDIVNGKYWICMDSETKETMEASDELIDLQAIFRHTTENPEEASKDLLYSSKYIEDNFLRKIIFETYKEANDSRLTKLETTVGTNEKDIEDKHYKLERRVTTAENTIAANKELEDTRYSEYTQFKKNIENNILSINNNLNTKANLGGSETQVFNVADPTSDWHAINLAYAKKNFNVDLINTHKTDFNNPHKTSIANLIDASIVDPTNNHILQYDSNTKKWKNAVLSVDLSNYYNKSEVDSKLDTKANTSNVYDKSEIDTKLQDVLTQADNRYSTLLTQKLEWTVGEGGNFNHIDDITPEEIQAGTQAVKEYCLANNLMDLYYEYVLNTASESEKLNIIKEKKKFEIQTKRDVALESGFVFKDHTFQTREKDKLNINGMAANILLDIQSGTNSITEITWIDLNDEKVNFTPQEFLTFVSKVTEYTQEVIFKANTLKEKINSSETVKSVDKIKWE
Physico‐chemical
properties
protein length:497 AA
molecular weight: 57153,10240 Da
isoelectric point:5,04971
aromaticity:0,08451
hydropathy:-0,69577

Domains

Domains [InterPro]
DC_1876
STR
1–446
DC_1876
IPR025484
STR
383–491
IPR025484
QXO06233.1
1 497
Architecture
STR
STR 1-491 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Campylobacter phage CJLB-12
[NCBI] 		2780170 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Campylobacter jejuni
[NCBI] 		197 cellular organisms > Bacteria > Pseudomonadati > Campylobacterota > Epsilonproteobacteria > Campylobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXO06233.1 [NCBI]
Genbank nucleotide accession
MW074125.1 [NCBI]
CDS location
range 103137 -> 104630
strand -
CDS
ATGCAATTTAAAAAAGTTGATGTTTTAATATCAGAAAATCTCACAAAAGAACAGTTAAAAGAAAAAGTTCTAACAGAACTTAATAAAATAAGCAAAGAATCAAATCCTAGTATTAGTTATATCGCTAATATTCACGATATAGTTAATGGTAAATATTGGATTTGTATGGATTCTGAAACTAAGGAGACTATGGAAGCATCAGATGAATTAATAGATCTTCAAGCAATTTTTAGACATACAACTGAAAATCCAGAAGAAGCTTCAAAAGATTTATTATACAGTTCTAAATATATAGAAGATAATTTCCTTCGAAAAATAATTTTTGAAACTTATAAGGAAGCTAATGATTCTAGGCTTACCAAATTAGAAACTACAGTAGGTACTAATGAAAAAGATATAGAAGATAAACATTATAAATTAGAAAGAAGAGTGACAACTGCTGAAAATACCATTGCTGCAAATAAAGAATTAGAAGATACTAGGTATAGTGAGTATACCCAATTTAAAAAAAATATAGAAAATAACATTCTTAGCATCAATAATAATTTAAATACAAAAGCAAATCTGGGTGGTTCTGAAACGCAAGTATTTAATGTTGCAGACCCAACAAGTGATTGGCACGCTATTAATTTAGCTTACGCCAAAAAGAATTTTAATGTAGATTTAATTAATACTCATAAGACAGACTTTAATAACCCACATAAAACAAGTATTGCTAACTTAATTGATGCAAGTATTGTTGACCCGACAAACAATCATATTTTACAATATGATTCAAATACTAAAAAATGGAAAAATGCAGTTCTAAGTGTAGATTTATCTAATTATTATAATAAATCTGAAGTAGATTCTAAATTAGATACTAAAGCCAACACAAGTAATGTTTATGATAAATCTGAAATCGATACTAAATTGCAAGATGTGTTGACACAAGCGGATAACAGATACTCTACATTATTAACACAAAAATTAGAATGGACTGTCGGAGAGGGAGGTAATTTCAATCATATAGATGACATTACACCTGAAGAAATTCAAGCGGGTACACAAGCAGTCAAAGAATACTGCTTAGCTAATAATCTTATGGATTTGTATTATGAATATGTACTAAATACTGCAAGTGAATCTGAAAAACTTAATATAATTAAAGAAAAGAAGAAGTTTGAAATACAAACAAAAAGGGACGTAGCTTTAGAATCTGGTTTTGTATTCAAAGACCATACATTCCAAACTAGGGAAAAGGATAAACTTAATATTAACGGAATGGCCGCTAATATATTGTTAGATATACAAAGTGGTACTAATTCAATAACTGAGATTACTTGGATTGACTTGAATGATGAAAAGGTTAATTTTACACCTCAAGAATTTTTAACATTTGTTTCAAAAGTAACCGAATATACTCAGGAAGTAATATTTAAAGCGAATACATTAAAAGAAAAAATTAATTCATCTGAAACTGTTAAATCTGTCGATAAAATTAAATGGGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
71dcff2f7c7ffac7c867d693427512d3d90b1b255d963a60fccee93ceb45b508
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7173
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophages are an effective tool to reduce Campylobacter contamination in foods Vikram,A., Woolston,J. and Sulakvelidze,A. 2017-11-23 — GenBank