Phage RBP Database

Genbank accession

CAB4204070.1 [GenBank]

Protein name

Phage tail collar domain containing protein

RBP type

TF

Evidence RBPdetect

Probability 0,90

TF

Evidence RBPdetect2

Probability 0,99

Protein sequence

MANIIKPKRSYTATNTPTLASGELGINAADGKIYLGNAAGSANILVSSLAFADHTGTVSNSQLDTTAVTPASYTNANITINAQGRITAASNGTAGSGTVTSVAMTVPTGLSVSGSPITTSGTLAVTLTAGYSIPTTSDQTNWGTAYTNRITSLTTTGSSGAATLSSNTLNIPTYTLAGLGGQASSASLTSLAGLTYAATSFVKMTAAGTFGLDTSTYLIGNQSITLSGDVTGSGTTAITTTLATVTVAKGGTGLTTLTANNVILGNGTSTPSFVAPGASGNLLTSNGTTWQSTAPAAASGTPTGALMPYAGATAPTGYLLCDGSSVSSSSYLALHAVISNTYGGSAYTGSVGLSFNLPDLRGRLPMGAGTGTGQNASGTGAPSGTAQTARTRGQWLGEETHQLTTTNMPSHSHNGATGNAGSHSHTLSREVLTYRGSGGDRYDPYPGSVWQGSAGAGLTLSTQADHSHTITANGGDGRHATIPPVVVLNYIIKT

Physico‐chemical properties

protein length:	494 AA
molecular weight:	48920,22190 Da
isoelectric point:	7,87960
aromaticity:	0,05263
hydropathy:	-0,02429

Domain architecture

CAB4204070.1

1 494 aa

ATT 291–365 · STR 366–493 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR037053
ATT

IPR037053

SSF88874
STR

SSF88874

IPR011083
ATT

IPR011083

CAB4204070.1

1494 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1699
STR

DC_1699 DC_1651

CAB4204070.1

1494 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR037053	ATT	IPR037053	291	361	Merged direct domain	Phage tail collar domain superfamily	N-terminal	Low	Positional only	37 proteins / 37 hits
SSF88874	STR	SSF88874	298	493	Merged direct domain	SSF88874	Central	Low	Positional only	109 proteins / 109 hits
IPR011083	ATT	DC_0235	304	365	InterPro cluster	Phage tail collar domain	C-terminal	Medium	Text match	1051 proteins / 1051 hits

Proteins with similar domain architecture

Phage

uncultured Caudovirales phage [NCBI] · taxon 2100421

Uroviricota Caudoviricetes Peduoviridae Maltschvirus maltsch

Host No host information

Genbank protein accession

CAB4204070.1 [NCBI]

Genbank nucleotide accession

LR797344 [NCBI]

CDS location

range 25558 -> 27042
strand +

CDS

ATGGCAAACATCATCAAGCCCAAACGCAGTTACACCGCCACCAACACCCCTACTTTAGCTAGTGGGGAACTTGGTATCAATGCAGCCGATGGGAAAATCTATTTAGGAAATGCTGCGGGTAGTGCGAATATTTTGGTGTCTTCCTTGGCTTTCGCAGATCACACCGGAACAGTGAGTAACTCCCAGCTAGACACCACAGCAGTGACACCTGCATCTTATACCAATGCAAACATCACAATCAATGCTCAGGGAAGAATCACGGCTGCATCTAATGGAACTGCTGGATCTGGAACAGTAACATCAGTGGCCATGACCGTTCCTACTGGCCTATCGGTTTCTGGTTCACCCATTACGACATCAGGAACTTTAGCCGTAACCCTAACTGCAGGCTATTCGATCCCAACCACCAGCGATCAAACAAACTGGGGAACAGCTTACACCAACCGCATTACATCCCTTACCACCACTGGTTCATCAGGCGCAGCAACGCTATCTAGCAACACCTTGAACATTCCCACCTACACCCTAGCTGGTTTGGGTGGTCAGGCTTCCTCAGCATCTTTAACATCATTAGCAGGGTTAACCTATGCTGCAACTTCCTTTGTTAAAATGACTGCTGCAGGCACCTTTGGTTTAGATACCTCAACTTACCTGATAGGCAATCAATCCATCACGCTTTCGGGTGATGTCACAGGATCAGGTACGACTGCGATCACCACTACCCTAGCTACGGTCACAGTAGCCAAGGGTGGAACTGGGCTAACCACACTCACGGCAAACAATGTCATCCTTGGCAATGGTACTTCCACACCAAGCTTTGTTGCTCCTGGTGCATCTGGCAACCTCCTCACATCCAACGGCACAACTTGGCAAAGCACAGCACCAGCAGCAGCATCTGGCACACCCACAGGTGCATTGATGCCCTATGCAGGGGCCACCGCACCTACTGGATATCTTTTATGTGATGGAAGTAGTGTGAGCAGTTCTAGTTATCTCGCATTGCACGCAGTCATTTCCAACACCTATGGTGGCAGTGCTTACACAGGGTCAGTAGGGTTAAGTTTCAATCTGCCAGATCTCAGGGGCAGGCTCCCTATGGGTGCTGGTACTGGCACAGGGCAGAACGCATCAGGCACAGGCGCACCAAGTGGAACCGCACAAACCGCAAGGACTAGGGGCCAGTGGCTAGGGGAAGAAACGCATCAGCTAACAACGACTAACATGCCGAGCCATAGTCATAATGGGGCAACAGGAAATGCTGGTAGTCATAGCCATACGCTCAGCAGAGAAGTGTTAACCTACAGAGGCAGCGGTGGCGACAGATACGACCCTTACCCAGGTTCTGTATGGCAAGGCTCGGCAGGGGCAGGACTAACGCTCAGTACGCAAGCAGATCATTCACACACAATCACCGCAAATGGTGGAGATGGCCGCCACGCAACTATTCCTCCTGTGGTAGTCCTTAACTACATCATCAAAACCTAG

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)