Protein

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Genbank accession
CAB4204070.1 [GenBank]
Protein name
Phage tail collar domain containing protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MANIIKPKRSYTATNTPTLASGELGINAADGKIYLGNAAGSANILVSSLAFADHTGTVSNSQLDTTAVTPASYTNANITINAQGRITAASNGTAGSGTVTSVAMTVPTGLSVSGSPITTSGTLAVTLTAGYSIPTTSDQTNWGTAYTNRITSLTTTGSSGAATLSSNTLNIPTYTLAGLGGQASSASLTSLAGLTYAATSFVKMTAAGTFGLDTSTYLIGNQSITLSGDVTGSGTTAITTTLATVTVAKGGTGLTTLTANNVILGNGTSTPSFVAPGASGNLLTSNGTTWQSTAPAAASGTPTGALMPYAGATAPTGYLLCDGSSVSSSSYLALHAVISNTYGGSAYTGSVGLSFNLPDLRGRLPMGAGTGTGQNASGTGAPSGTAQTARTRGQWLGEETHQLTTTNMPSHSHNGATGNAGSHSHTLSREVLTYRGSGGDRYDPYPGSVWQGSAGAGLTLSTQADHSHTITANGGDGRHATIPPVVVLNYIIKT
Physico‐chemical
properties
protein length:494 AA
molecular weight: 48920,22190 Da
isoelectric point:7,87960
aromaticity:0,05263
hydropathy:-0,02429

Domains

Domains [InterPro]
IPR037053
291–361
IPR037053
SSF88874
298–493
SSF88874
IPR011083
304–365
IPR011083
CAB4204070.1
1 494
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4204070.1 [NCBI]
Genbank nucleotide accession
LR797344 [NCBI]
CDS location
range 25558 -> 27042
strand +
CDS
ATGGCAAACATCATCAAGCCCAAACGCAGTTACACCGCCACCAACACCCCTACTTTAGCTAGTGGGGAACTTGGTATCAATGCAGCCGATGGGAAAATCTATTTAGGAAATGCTGCGGGTAGTGCGAATATTTTGGTGTCTTCCTTGGCTTTCGCAGATCACACCGGAACAGTGAGTAACTCCCAGCTAGACACCACAGCAGTGACACCTGCATCTTATACCAATGCAAACATCACAATCAATGCTCAGGGAAGAATCACGGCTGCATCTAATGGAACTGCTGGATCTGGAACAGTAACATCAGTGGCCATGACCGTTCCTACTGGCCTATCGGTTTCTGGTTCACCCATTACGACATCAGGAACTTTAGCCGTAACCCTAACTGCAGGCTATTCGATCCCAACCACCAGCGATCAAACAAACTGGGGAACAGCTTACACCAACCGCATTACATCCCTTACCACCACTGGTTCATCAGGCGCAGCAACGCTATCTAGCAACACCTTGAACATTCCCACCTACACCCTAGCTGGTTTGGGTGGTCAGGCTTCCTCAGCATCTTTAACATCATTAGCAGGGTTAACCTATGCTGCAACTTCCTTTGTTAAAATGACTGCTGCAGGCACCTTTGGTTTAGATACCTCAACTTACCTGATAGGCAATCAATCCATCACGCTTTCGGGTGATGTCACAGGATCAGGTACGACTGCGATCACCACTACCCTAGCTACGGTCACAGTAGCCAAGGGTGGAACTGGGCTAACCACACTCACGGCAAACAATGTCATCCTTGGCAATGGTACTTCCACACCAAGCTTTGTTGCTCCTGGTGCATCTGGCAACCTCCTCACATCCAACGGCACAACTTGGCAAAGCACAGCACCAGCAGCAGCATCTGGCACACCCACAGGTGCATTGATGCCCTATGCAGGGGCCACCGCACCTACTGGATATCTTTTATGTGATGGAAGTAGTGTGAGCAGTTCTAGTTATCTCGCATTGCACGCAGTCATTTCCAACACCTATGGTGGCAGTGCTTACACAGGGTCAGTAGGGTTAAGTTTCAATCTGCCAGATCTCAGGGGCAGGCTCCCTATGGGTGCTGGTACTGGCACAGGGCAGAACGCATCAGGCACAGGCGCACCAAGTGGAACCGCACAAACCGCAAGGACTAGGGGCCAGTGGCTAGGGGAAGAAACGCATCAGCTAACAACGACTAACATGCCGAGCCATAGTCATAATGGGGCAACAGGAAATGCTGGTAGTCATAGCCATACGCTCAGCAGAGAAGTGTTAACCTACAGAGGCAGCGGTGGCGACAGATACGACCCTTACCCAGGTTCTGTATGGCAAGGCTCGGCAGGGGCAGGACTAACGCTCAGTACGCAAGCAGATCATTCACACACAATCACCGCAAATGGTGGAGATGGCCGCCACGCAACTATTCCTCCTGTGGTAGTCCTTAACTACATCATCAAAACCTAG

Tertiary structure

PDB ID
d4f7162de135b15310c037d98662fb9d4b797f77c6939dde3eaa4ccbe9f39fba
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7047
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50