Protein
View in Explore- Genbank accession
- XPO97728.1 [GenBank]
- Protein name
- Endo-alpha-sialidase
- RBP type
-
TSPTSPTSP
- Protein sequence
-
MSTTITNLPETSKVNDSDYLVLDQPDKTVKSTVSNFLTDTGVVLATQLKDISGATKYPELQMARWRDEGDVRGWGAKGDGVVDDTSALQEAINQKDYIKIPAGTFMFSSLNIRDGVNIVGSGYTATTLKQITGSNTTAIVATASNFSIQYLGIDCNYFTSAWNSASGTLGNTTGNGLEVQGFGFTIDILLNNVAGVGAWFKNPGPENSASRIAIYDISIVGRDFGKEGIIIQGPNDGILRKAWIGRAGILPRPLAESSVATSTVYPGSEVDGIVIDGANIEIGDVHTYAAWSGTAFRTRNTVRLTEGGRVIAESSRAQINISANTYGSAFFDIRSLSLLHPNWTGDIPYYTLPNASFDGATIAASVGFSCRITCKRTITQPARVVGSTAVVVTNDAQVEMNFSNSTAPAGDAEAGRLYSGIGLYSSSSVGGMLKVSGKNCNGELVYLDGAGQTVTFNARSCTVAIRRSSKQNSMRGNNITGSVYRCDTGFVSEGTPTSENISISMELLSGQTPFYGDPPDLNRSQNWNISASINNIGYSTSQRLSANLDISTAGDKTVSIPHRFLYTPDFRQIQLTIDDRSTPTTSTVTCWVNDITATNIVVGYRPSAADTDTSRANLRVNVMIQ
- Physico‐chemical
properties -
protein length: 625 AA molecular weight: 66673,50420 Da isoelectric point: 5,27332 aromaticity: 0,07840 hydropathy: -0,16208
Domains
Domain architecture
XPO97728.1
1
625 aa
STR 70–409 ·
ATT Attachment Domain
STR Structural Domain
RBD Receptor-Binding Domain
CBM Carbohydrate-Binding Module
LEC Lectin-like Domain
ENZ Enzymatic Domain
CHP Intramolecular Chaperone
LNK Linker/Spacer Domain
TAS Tail-Associated Structural
TTP Tail Tubular Protein
UNK Uncharacterized Domain
Unmapped
Proteins with similar domain architecture
Tail Spike Domain Segmentation
Segmented into three structural domains: N-terminal, central, and C-terminal.
Domain layout
XPO97728.1
1
625 aa
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 84 | 84 | 0,9770 |
| Central domain | 85 | 534 | 451 | 0,9914 |
| C-terminal | 535 | 625 | 90 | 0,9825 |
N-terminal
Central domain
C-terminal
View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.
Taxonomy
Host
Shigella flexneri
[NCBI]
· taxon 623
Coding sequence (CDS)
Genbank protein accession
XPO97728.1
[NCBI]
Genbank nucleotide accession
PQ571307
[NCBI]
CDS location
range 136116 -> 137993
strand -
strand -
CDS
ATGTCAACTACAATTACTAATTTACCCGAAACATCAAAAGTTAATGATTCTGATTACCTGGTTTTAGACCAACCTGATAAGACTGTTAAAAGCACAGTTTCCAACTTTCTTACTGACACTGGGGTGGTTTTAGCCACCCAGCTAAAAGATATTTCTGGAGCTACCAAGTATCCAGAACTTCAAATGGCGCGCTGGCGCGACGAAGGGGATGTTAGGGGATGGGGCGCGAAAGGTGACGGGGTGGTGGATGATACGTCAGCCCTGCAAGAGGCCATCAACCAGAAAGATTATATTAAAATCCCAGCTGGAACGTTTATGTTCAGCTCATTAAATATTCGAGACGGAGTAAACATTGTAGGCTCTGGATACACCGCCACAACCCTAAAGCAAATTACAGGCAGCAACACCACCGCGATAGTGGCAACGGCAAGCAACTTCTCTATCCAGTATCTTGGAATCGATTGTAATTACTTCACCAGCGCCTGGAACTCCGCATCCGGAACGCTTGGTAATACCACTGGAAACGGGCTTGAGGTGCAGGGATTCGGGTTCACTATCGATATTCTACTAAACAACGTTGCGGGCGTTGGAGCGTGGTTTAAAAATCCAGGGCCTGAAAATAGCGCATCGCGTATCGCGATTTACGATATCAGTATCGTTGGTCGTGATTTCGGCAAAGAGGGAATTATCATCCAAGGGCCAAACGACGGCATATTGCGAAAAGCATGGATAGGTCGGGCGGGGATATTGCCAAGACCTTTGGCAGAAAGCTCAGTTGCGACCTCAACCGTGTACCCAGGGTCCGAAGTTGACGGGATTGTTATTGATGGGGCTAATATTGAGATTGGAGATGTCCATACATATGCTGCGTGGTCTGGAACCGCCTTTAGAACAAGGAATACCGTGCGACTAACTGAGGGGGGACGTGTTATCGCAGAAAGTTCTCGTGCACAGATAAATATTAGCGCAAATACATACGGGTCAGCATTTTTTGATATCAGGAGTCTTAGTCTTCTACATCCAAATTGGACTGGAGATATTCCATATTACACATTACCAAATGCATCATTTGATGGCGCAACGATAGCAGCCTCAGTTGGATTTTCTTGTCGCATTACATGTAAACGAACTATAACCCAACCAGCAAGGGTTGTTGGTTCTACAGCTGTAGTGGTTACAAATGATGCTCAGGTTGAAATGAATTTCTCAAACTCAACTGCACCGGCAGGAGATGCAGAAGCAGGGCGTTTATATTCAGGGATTGGGCTATATTCATCATCTTCCGTTGGTGGGATGTTAAAGGTTTCTGGAAAGAATTGTAATGGCGAACTAGTCTATTTAGATGGGGCTGGGCAGACAGTAACATTTAATGCTAGATCTTGTACTGTGGCCATTCGTAGATCTTCCAAGCAAAACTCTATGCGTGGAAATAATATTACAGGATCAGTTTACCGTTGCGATACTGGTTTTGTGTCTGAGGGAACCCCTACATCAGAGAATATAAGCATATCAATGGAGTTATTAAGCGGACAGACCCCCTTCTATGGAGATCCTCCTGATTTAAATAGGAGCCAGAATTGGAATATATCAGCATCAATAAATAACATAGGGTATTCAACAAGCCAGCGATTAAGCGCAAACCTGGATATATCAACAGCTGGAGACAAGACCGTCAGCATCCCTCATCGATTCCTGTATACGCCAGATTTCAGGCAAATACAGTTAACGATAGATGACAGATCCACTCCAACAACCTCGACAGTAACCTGCTGGGTGAACGACATTACAGCAACAAATATCGTCGTTGGGTACAGACCAAGCGCGGCAGACACTGACACATCCCGTGCAAACCTTCGGGTAAATGTTATGATTCAGTAA