Protein

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Genbank accession
XPO97728.1 [GenBank]
Protein name
Endo-alpha-sialidase
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSTTITNLPETSKVNDSDYLVLDQPDKTVKSTVSNFLTDTGVVLATQLKDISGATKYPELQMARWRDEGDVRGWGAKGDGVVDDTSALQEAINQKDYIKIPAGTFMFSSLNIRDGVNIVGSGYTATTLKQITGSNTTAIVATASNFSIQYLGIDCNYFTSAWNSASGTLGNTTGNGLEVQGFGFTIDILLNNVAGVGAWFKNPGPENSASRIAIYDISIVGRDFGKEGIIIQGPNDGILRKAWIGRAGILPRPLAESSVATSTVYPGSEVDGIVIDGANIEIGDVHTYAAWSGTAFRTRNTVRLTEGGRVIAESSRAQINISANTYGSAFFDIRSLSLLHPNWTGDIPYYTLPNASFDGATIAASVGFSCRITCKRTITQPARVVGSTAVVVTNDAQVEMNFSNSTAPAGDAEAGRLYSGIGLYSSSSVGGMLKVSGKNCNGELVYLDGAGQTVTFNARSCTVAIRRSSKQNSMRGNNITGSVYRCDTGFVSEGTPTSENISISMELLSGQTPFYGDPPDLNRSQNWNISASINNIGYSTSQRLSANLDISTAGDKTVSIPHRFLYTPDFRQIQLTIDDRSTPTTSTVTCWVNDITATNIVVGYRPSAADTDTSRANLRVNVMIQ
Physico‐chemical
properties
protein length:625 AA
molecular weight: 66673,50420 Da
isoelectric point:5,27332
aromaticity:0,07840
hydropathy:-0,16208

Domains

Domains [InterPro]
DC_0079
ATT
1–39
DC_0079 IPR012334
IPR011050
STR
70–296
IPR011050 DC_2304
IPR024535
ENZ
71–143
IPR024535
XPO97728.1
1 625
Architecture
ATT
STR
RBD
ATT 1-39 | STR 70-409 | RBD 410-625
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPO97728.1
1 625
Domain Start End Length (AA) Confidence
N-terminal 1 84 84 0,9770
Central domain 85 534 451 0,9914
C-terminal 535 625 90 0,9825
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-84
Central
85-534
C-terminal
535-625

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage SF1-1
[NCBI] 		3385252 Viruses >
Host Shigella flexneri
[NCBI] 		623 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPO97728.1 [NCBI]
Genbank nucleotide accession
PQ571307 [NCBI]
CDS location
range 136116 -> 137993
strand -
CDS
ATGTCAACTACAATTACTAATTTACCCGAAACATCAAAAGTTAATGATTCTGATTACCTGGTTTTAGACCAACCTGATAAGACTGTTAAAAGCACAGTTTCCAACTTTCTTACTGACACTGGGGTGGTTTTAGCCACCCAGCTAAAAGATATTTCTGGAGCTACCAAGTATCCAGAACTTCAAATGGCGCGCTGGCGCGACGAAGGGGATGTTAGGGGATGGGGCGCGAAAGGTGACGGGGTGGTGGATGATACGTCAGCCCTGCAAGAGGCCATCAACCAGAAAGATTATATTAAAATCCCAGCTGGAACGTTTATGTTCAGCTCATTAAATATTCGAGACGGAGTAAACATTGTAGGCTCTGGATACACCGCCACAACCCTAAAGCAAATTACAGGCAGCAACACCACCGCGATAGTGGCAACGGCAAGCAACTTCTCTATCCAGTATCTTGGAATCGATTGTAATTACTTCACCAGCGCCTGGAACTCCGCATCCGGAACGCTTGGTAATACCACTGGAAACGGGCTTGAGGTGCAGGGATTCGGGTTCACTATCGATATTCTACTAAACAACGTTGCGGGCGTTGGAGCGTGGTTTAAAAATCCAGGGCCTGAAAATAGCGCATCGCGTATCGCGATTTACGATATCAGTATCGTTGGTCGTGATTTCGGCAAAGAGGGAATTATCATCCAAGGGCCAAACGACGGCATATTGCGAAAAGCATGGATAGGTCGGGCGGGGATATTGCCAAGACCTTTGGCAGAAAGCTCAGTTGCGACCTCAACCGTGTACCCAGGGTCCGAAGTTGACGGGATTGTTATTGATGGGGCTAATATTGAGATTGGAGATGTCCATACATATGCTGCGTGGTCTGGAACCGCCTTTAGAACAAGGAATACCGTGCGACTAACTGAGGGGGGACGTGTTATCGCAGAAAGTTCTCGTGCACAGATAAATATTAGCGCAAATACATACGGGTCAGCATTTTTTGATATCAGGAGTCTTAGTCTTCTACATCCAAATTGGACTGGAGATATTCCATATTACACATTACCAAATGCATCATTTGATGGCGCAACGATAGCAGCCTCAGTTGGATTTTCTTGTCGCATTACATGTAAACGAACTATAACCCAACCAGCAAGGGTTGTTGGTTCTACAGCTGTAGTGGTTACAAATGATGCTCAGGTTGAAATGAATTTCTCAAACTCAACTGCACCGGCAGGAGATGCAGAAGCAGGGCGTTTATATTCAGGGATTGGGCTATATTCATCATCTTCCGTTGGTGGGATGTTAAAGGTTTCTGGAAAGAATTGTAATGGCGAACTAGTCTATTTAGATGGGGCTGGGCAGACAGTAACATTTAATGCTAGATCTTGTACTGTGGCCATTCGTAGATCTTCCAAGCAAAACTCTATGCGTGGAAATAATATTACAGGATCAGTTTACCGTTGCGATACTGGTTTTGTGTCTGAGGGAACCCCTACATCAGAGAATATAAGCATATCAATGGAGTTATTAAGCGGACAGACCCCCTTCTATGGAGATCCTCCTGATTTAAATAGGAGCCAGAATTGGAATATATCAGCATCAATAAATAACATAGGGTATTCAACAAGCCAGCGATTAAGCGCAAACCTGGATATATCAACAGCTGGAGACAAGACCGTCAGCATCCCTCATCGATTCCTGTATACGCCAGATTTCAGGCAAATACAGTTAACGATAGATGACAGATCCACTCCAACAACCTCGACAGTAACCTGCTGGGTGAACGACATTACAGCAACAAATATCGTCGTTGGGTACAGACCAAGCGCGGCAGACACTGACACATCCCGTGCAAACCTTCGGGTAAATGTTATGATTCAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7ee7c2d2642864566bced5e7241559f41a7ed5927b2de21ffbcdc7ca4ffce441
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7199
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50