Phage RBP Database

Genbank accession

GENB_9a0762a22b7b [GenBank]

Protein name

receptor binding protein

RBP type

TF

Evidence RBPdetect

Probability 0,80

Seq2Symm

C1 confidence 0,766

C1	0,766
I	0,426
C3	0,011

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MNLTPNDMLKALASIGLDGIIGAGLVSSAGVKPLRRNVAIYGDSRTANCSSGALPNKITENYGYASWLGQYSGGRIFFEPAFNFGVGGNTSAQWAARVNDVIAAPADVVVCLISTNDRTADFTLAQTQQNIEGVVMKLKQAGKIVVFVNETPRGGANALSAPRQAIHEQVRAWINSYLPKLGVRVVDVWDKMTDTAAVTVDGLHFNPVGARIVGEALAKEIQDLFNSPVPLPRVSSAFDASTNPFGQLNTNALLTGTTGTKNSNANTTGDVATGYTVAGSSWTGMSVVASKEVASTGEAQVLKFSGTPTASGALYTFEQVINLANAKLAANIKAVADIEFEMTGCLGVSLDFRFLDSGTFNSKCCDRYQDGFPMSPIKVDGVQETPSTSITATCTEVKIRVSIYGSQNVPMNGTVKIRQLAAIAA

Physico‐chemical properties

protein length:	425 AA
molecular weight:	44724,15340 Da
isoelectric point:	6,74448
aromaticity:	0,07294
hydropathy:	0,04047

Domain architecture

GENB_9a0762a22b7b

1 425 aa

STR 35–225 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

SSF52266
STR

SSF52266

GENB_9a0762a22b7b

1425 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_2015
RBD

DC_2015

GENB_9a0762a22b7b

1425 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
SSF52266	STR	SSF52266	35	225	Merged direct domain	SSF52266	Central	Low	Positional only	227 proteins / 227 hits

Proteins with similar domain architecture

Phage

Pectobacterium phage Bobbio [NCBI] · taxon 2686298

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host No host information

Genbank protein accession

MN812694.1_CDS_[79844..81121] [NCBI]

Genbank nucleotide accession

MN812694.1 [NCBI]

CDS location

range 79844 -> 81121
strand +

CDS

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)