Protein

View in Explore
Genbank accession
QPB12521.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,69
TF
Evidence RBPdetect2
Probability 0,97
Protein sequence
MGKGGGKQHTPYEAPNDLTSRQKLSIIDLVSEGPIEGPVGDLQGVFLNDTPVIDQSGNSNVNGMTAQWVSGTLEQPPLEGFASSSSETPVGVEVKKSTPVTRTITSRNIDRLRLTFGTQALVEVKDNGDRVGTSVELQIQVQRNGAWVTEKNVTIRGKRSNSPYLMAVVIDKLPPPPFGVRIVRITEDSTSDKLQNNTMWSSYTEITDIIQTYPGSAVAGLTFESEQFGNQFPRRNYLVKGRIIQVPDNYDPETRTYSGIWSGVFKPAYTNNPAWVLRDLLTHPIYGMGKRLNIAMIDKFALYVIAQHNDQLVPDGFGGKEPRATCNAYITDLRKAHDVISDLCSMMRLMPVWNGQQMTFVQDRPSDTVWPYTNANVINGRFNYSFSPLKARHNIIEVRFIDPSNGWKTSIELVSDDALVAKFGPNVLRVDAFGCTSRGQAHRYGLWILATERLESQTVDFSVGAEGLRHLPGDIIEIMDNDWVSEQVGGRLLAIDATQKIFTLDREVTPPKSGTAMISVINGAGKPERVKITSFLSDNQIKVEQMPKGVRAKGIWAIAQPNLARRLFRAMTVSDNGDGTYAITAVQHVPEKEAIVDQGAKFEPLPDTPLGGYLPPVENLSVEVSPDNESWQVEAHWTTSASVRGVDFLLKLTQADRIVGTAKTSDNFYRLGGLPQGNYVLSVVPQNKEGQKGEQSSVSFDINPPPPPSYIDVEPGFFSLGVIPHVGGQNALRLQYEFWFSEKQIQNINDVEYLAEYLGSGTMWVIQGRKLKAGQTYYVYVRTVNPVGKSQFVEASGKPEDRADEILEVIGDTFLSTEAGKQMQEQIDFSKEAIAELELDTIDVKQKVVSIDRDVEAVSEAVMMNTQFTTELHFSLKEEVADRKAEIFRIEQVQVTDREAAARWQEQITAKVDYNASEILNIKDAQSSYEKATAQQISQVKAELGETNKEVGDIKGRVTTVETATVDLKQAQAKFEQSTTAQFGEMRGYITNIETSLTNIEFAVSEAIMQTTAQVNETNSELLKTKAEVTRLATATATNEKATAQLVESVKAQHDQSEAEFIDVRKSIAEKDKAQSERTEQVRAELEKDINANKEGIDKNNNELSKVSAAVTNNTQSIATLEETTTQIKQTQQSQHEDTEAKIGKLSETTASNTEAITEVKEQSQSRFESNEATIANMQQTIANAESSLSEMGMQLTAEVGNQAIEQLRIKASITRLDTVTADKFQAFAQSFEKIETQFNDVNSSITTLKKTVSDNEKSQAETNQLIMSEIGDNKSAIELRGQTIFDHQGNGSAIYTIKTGINWNGQYYDAKFMMGATVQNGKVVTQIGFSADTFGIFNPSSGKLEPVFFVENGQVFINEAFINKATIEKIIVGTDMRSKNYVAGKTGTRIDMNNGAIEINGSDNNGSRMTLKNDQLAVFGGNKPKVIIGRLYGI
Physico‐chemical
properties
protein length:1435 AA
molecular weight: 158435,84120 Da
isoelectric point:5,08967
aromaticity:0,07178
hydropathy:-0,42557

Domains

View on InterPro
Domain architecture
QPB12521.1
1 1435 aa
ATT 85–208 · ATT 334–495 · STR 606–705 · ATT 707–810 · RBD 1278–1413 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
QPB12521.1
1 1435 aa
Domain Start End Length (AA) Confidence
N-terminal 1 1399 1399 0,9628
Central domain 1400 1424 26 0,4917
C-terminal 1425 1435 10 0,8381
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Providencia phage PSTCR8lys [NCBI] · taxon 2783551
No lineage information
Host
Providencia stuartii [NCBI] · taxon 588
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Coding sequence (CDS)

Genbank protein accession
QPB12521.1 [NCBI]
Genbank nucleotide accession
MW057859.1 [NCBI]
CDS location
range 35793 -> 40100
strand +
CDS
ATGGGTAAGGGTGGCGGCAAACAGCATACTCCGTATGAAGCGCCAAACGATTTAACATCACGACAAAAGTTATCAATTATTGACCTTGTGAGTGAGGGGCCAATTGAAGGGCCGGTCGGTGATTTGCAGGGAGTATTCTTAAATGATACGCCTGTTATTGATCAGTCAGGAAACAGTAACGTTAATGGAATGACGGCTCAATGGGTTTCTGGAACACTGGAGCAACCACCGTTAGAGGGCTTTGCTTCTTCATCCAGTGAGACCCCCGTGGGGGTAGAGGTGAAAAAAAGCACCCCCGTTACTCGCACGATCACATCACGAAATATTGACCGGCTTCGTTTAACGTTTGGCACACAGGCACTTGTTGAAGTTAAAGATAACGGGGATCGTGTTGGCACTTCTGTTGAGTTACAAATTCAAGTGCAACGCAATGGCGCTTGGGTGACAGAAAAAAATGTCACTATCCGAGGAAAAAGAAGTAATTCACCTTATTTGATGGCGGTTGTTATTGATAAATTACCACCGCCGCCATTCGGTGTACGCATAGTCAGGATCACGGAAGACAGTACAAGCGATAAGTTACAAAACAACACCATGTGGTCAAGTTATACTGAGATCACCGATATCATTCAAACCTATCCCGGCTCTGCGGTTGCAGGGCTTACTTTTGAGAGTGAGCAATTCGGTAACCAATTCCCACGCCGCAACTATCTTGTTAAAGGGCGCATTATTCAAGTGCCTGATAATTACGATCCTGAAACGAGAACTTACTCCGGTATTTGGAGTGGCGTTTTTAAACCAGCATATACGAACAATCCGGCGTGGGTGCTACGAGATCTTTTAACCCACCCGATCTATGGAATGGGTAAGCGGCTTAATATTGCCATGATTGACAAGTTTGCTCTCTATGTCATTGCTCAACATAATGATCAGTTGGTGCCTGACGGCTTTGGCGGCAAAGAGCCTCGAGCGACCTGCAACGCTTACATTACCGATTTGCGAAAAGCTCATGACGTCATCAGTGATCTCTGTTCAATGATGCGCCTCATGCCTGTGTGGAACGGGCAGCAAATGACATTTGTTCAAGATCGTCCGAGCGACACAGTGTGGCCATACACAAATGCCAATGTCATCAATGGTCGATTTAACTACAGTTTTAGCCCATTAAAAGCACGTCATAATATTATCGAAGTGCGGTTTATTGACCCATCCAACGGATGGAAAACCAGTATTGAGCTGGTTTCTGATGATGCATTAGTTGCTAAATTTGGCCCTAATGTTTTAAGGGTGGATGCGTTTGGTTGTACCAGCCGAGGTCAAGCCCACCGGTATGGCTTATGGATCTTAGCCACGGAAAGATTGGAGTCTCAAACCGTTGATTTTAGTGTTGGCGCTGAAGGCCTACGGCACTTACCCGGTGATATTATTGAAATTATGGATAATGACTGGGTTTCTGAGCAAGTTGGTGGGCGTTTGCTTGCTATTGATGCTACTCAGAAAATATTCACATTAGACAGAGAAGTGACCCCACCAAAATCCGGTACCGCTATGATCTCGGTAATTAATGGCGCAGGAAAGCCGGAGCGCGTTAAAATTACAAGCTTCCTATCCGACAACCAGATAAAAGTTGAACAAATGCCAAAAGGGGTCAGAGCTAAAGGCATTTGGGCGATAGCGCAACCTAATTTAGCAAGACGGCTATTTAGGGCAATGACCGTTTCTGATAATGGGGATGGCACCTATGCGATTACAGCGGTGCAGCATGTTCCAGAGAAAGAAGCGATTGTTGATCAAGGGGCTAAATTCGAACCGCTGCCTGATACGCCTTTGGGTGGGTATTTACCCCCAGTTGAAAACCTTTCAGTTGAAGTTAGTCCAGATAATGAAAGCTGGCAAGTTGAGGCGCACTGGACGACATCAGCCTCTGTACGTGGTGTTGACTTTCTTCTTAAGCTGACCCAAGCCGATCGCATTGTTGGTACCGCGAAAACATCGGATAACTTTTATCGCCTAGGTGGCTTACCCCAAGGTAACTATGTTTTGTCAGTGGTACCACAAAACAAAGAAGGGCAAAAGGGGGAGCAATCATCAGTATCATTTGATATTAACCCACCGCCACCGCCGTCTTACATTGATGTTGAGCCGGGCTTTTTTAGCCTAGGGGTTATCCCTCACGTTGGCGGTCAAAATGCCCTGCGCTTGCAATATGAATTTTGGTTTTCTGAGAAGCAGATACAGAATATCAATGATGTTGAGTATCTAGCGGAATACCTCGGTAGCGGTACGATGTGGGTTATTCAAGGAAGAAAGCTTAAAGCTGGCCAGACATATTATGTTTATGTCAGAACTGTAAACCCAGTGGGCAAATCGCAGTTTGTTGAAGCTAGCGGCAAGCCAGAGGATCGCGCTGATGAAATACTGGAAGTTATTGGCGACACCTTCCTCTCCACCGAAGCAGGCAAGCAGATGCAGGAGCAGATTGACTTTAGCAAAGAAGCGATTGCAGAGCTTGAGTTGGACACGATTGATGTGAAGCAGAAAGTTGTCAGCATTGACAGAGATGTTGAAGCGGTCAGCGAAGCAGTAATGATGAACACTCAGTTCACTACAGAATTACATTTTAGTTTGAAAGAAGAAGTTGCTGATAGAAAAGCTGAGATATTCCGCATTGAGCAAGTGCAAGTCACTGACAGAGAAGCCGCTGCGCGCTGGCAAGAGCAAATCACCGCAAAAGTCGATTATAACGCATCTGAAATCCTGAATATTAAGGATGCTCAGTCGAGTTATGAGAAAGCAACAGCGCAGCAAATCAGTCAAGTTAAAGCGGAATTAGGAGAGACAAATAAAGAAGTTGGTGACATCAAAGGTCGTGTTACTACAGTCGAAACAGCGACAGTTGACTTGAAGCAAGCGCAAGCGAAGTTTGAACAATCAACAACGGCTCAGTTTGGTGAAATGCGCGGCTACATTACTAACATTGAAACGTCACTGACTAACATCGAGTTTGCAGTATCAGAAGCGATTATGCAGACAACTGCACAAGTTAATGAAACTAACTCAGAGTTACTGAAAACGAAAGCAGAAGTCACTCGACTTGCAACAGCGACGGCAACAAATGAAAAAGCTACTGCACAATTAGTTGAAAGTGTAAAAGCACAACATGATCAGTCAGAAGCTGAATTTATTGATGTGCGTAAATCAATCGCAGAGAAAGACAAAGCACAGTCAGAGCGCACAGAACAAGTGCGCGCAGAGCTTGAAAAAGATATCAACGCTAACAAAGAGGGTATTGATAAAAACAACAATGAGCTATCGAAAGTTAGTGCTGCTGTGACAAACAATACACAGTCAATCGCAACACTAGAAGAAACGACAACTCAGATTAAGCAAACTCAACAAAGTCAGCATGAAGATACAGAAGCTAAAATCGGCAAGCTATCTGAAACAACAGCAAGCAACACGGAAGCGATAACGGAAGTCAAAGAGCAGAGTCAGTCTCGCTTTGAAAGCAATGAAGCGACGATTGCAAACATGCAGCAAACAATTGCTAATGCTGAAAGCTCACTGTCTGAAATGGGTATGCAGTTGACTGCGGAGGTTGGAAATCAAGCAATTGAGCAACTGAGAATTAAAGCGTCAATTACTCGTTTAGATACAGTAACAGCTGACAAGTTTCAGGCATTCGCACAGTCATTCGAGAAAATTGAAACTCAATTCAATGATGTCAATTCAAGTATTACAACTCTCAAGAAAACTGTATCCGACAATGAGAAATCACAAGCTGAAACTAATCAGTTAATTATGTCTGAAATTGGAGATAACAAGTCAGCAATTGAACTTCGTGGTCAAACTATTTTCGATCACCAAGGGAATGGCTCTGCTATCTACACAATCAAGACCGGCATTAATTGGAATGGTCAATATTACGATGCTAAATTCATGATGGGGGCGACTGTTCAGAATGGAAAAGTAGTGACTCAGATCGGCTTTAGTGCTGATACGTTTGGTATTTTCAATCCATCTAGCGGTAAATTGGAACCCGTTTTTTTCGTTGAGAATGGACAGGTCTTTATCAATGAAGCGTTTATCAACAAAGCTACAATTGAAAAAATCATTGTGGGTACAGATATGCGCTCTAAAAATTATGTCGCAGGGAAAACAGGGACACGGATTGATATGAATAACGGGGCTATTGAAATAAATGGAAGCGACAATAATGGGTCACGCATGACGCTTAAAAACGACCAACTTGCAGTATTTGGAGGAAATAAACCTAAGGTAATTATTGGAAGGTTGTATGGAATATGA

Genome Context

Tertiary structure

QPB12521.1
ColabFold structure
Source ColabFold
pLDDT 74.2
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Novel bacteriophages targeting Providencia spp. as potential agents for phage therapy Rakov,C., Alkalay-Oren,S., Coppenhagen-Glazer,S. and Hazan,R. 2021-04-02 — GenBank