Protein

View in Explore
Genbank accession
QPB12521.1 [GenBank]
Protein name
tail tip host specificity protein J
RBP type
TSP
Evidence RBPdetect
Probability 0,69
TF
Evidence RBPdetect2
Probability 0,96
TF
Evidence Phold
Probability 1,00
Protein sequence
MGKGGGKQHTPYEAPNDLTSRQKLSIIDLVSEGPIEGPVGDLQGVFLNDTPVIDQSGNSNVNGMTAQWVSGTLEQPPLEGFASSSSETPVGVEVKKSTPVTRTITSRNIDRLRLTFGTQALVEVKDNGDRVGTSVELQIQVQRNGAWVTEKNVTIRGKRSNSPYLMAVVIDKLPPPPFGVRIVRITEDSTSDKLQNNTMWSSYTEITDIIQTYPGSAVAGLTFESEQFGNQFPRRNYLVKGRIIQVPDNYDPETRTYSGIWSGVFKPAYTNNPAWVLRDLLTHPIYGMGKRLNIAMIDKFALYVIAQHNDQLVPDGFGGKEPRATCNAYITDLRKAHDVISDLCSMMRLMPVWNGQQMTFVQDRPSDTVWPYTNANVINGRFNYSFSPLKARHNIIEVRFIDPSNGWKTSIELVSDDALVAKFGPNVLRVDAFGCTSRGQAHRYGLWILATERLESQTVDFSVGAEGLRHLPGDIIEIMDNDWVSEQVGGRLLAIDATQKIFTLDREVTPPKSGTAMISVINGAGKPERVKITSFLSDNQIKVEQMPKGVRAKGIWAIAQPNLARRLFRAMTVSDNGDGTYAITAVQHVPEKEAIVDQGAKFEPLPDTPLGGYLPPVENLSVEVSPDNESWQVEAHWTTSASVRGVDFLLKLTQADRIVGTAKTSDNFYRLGGLPQGNYVLSVVPQNKEGQKGEQSSVSFDINPPPPPSYIDVEPGFFSLGVIPHVGGQNALRLQYEFWFSEKQIQNINDVEYLAEYLGSGTMWVIQGRKLKAGQTYYVYVRTVNPVGKSQFVEASGKPEDRADEILEVIGDTFLSTEAGKQMQEQIDFSKEAIAELELDTIDVKQKVVSIDRDVEAVSEAVMMNTQFTTELHFSLKEEVADRKAEIFRIEQVQVTDREAAARWQEQITAKVDYNASEILNIKDAQSSYEKATAQQISQVKAELGETNKEVGDIKGRVTTVETATVDLKQAQAKFEQSTTAQFGEMRGYITNIETSLTNIEFAVSEAIMQTTAQVNETNSELLKTKAEVTRLATATATNEKATAQLVESVKAQHDQSEAEFIDVRKSIAEKDKAQSERTEQVRAELEKDINANKEGIDKNNNELSKVSAAVTNNTQSIATLEETTTQIKQTQQSQHEDTEAKIGKLSETTASNTEAITEVKEQSQSRFESNEATIANMQQTIANAESSLSEMGMQLTAEVGNQAIEQLRIKASITRLDTVTADKFQAFAQSFEKIETQFNDVNSSITTLKKTVSDNEKSQAETNQLIMSEIGDNKSAIELRGQTIFDHQGNGSAIYTIKTGINWNGQYYDAKFMMGATVQNGKVVTQIGFSADTFGIFNPSSGKLEPVFFVENGQVFINEAFINKATIEKIIVGTDMRSKNYVAGKTGTRIDMNNGAIEINGSDNNGSRMTLKNDQLAVFGGNKPKVIIGRLYGI
Physico‐chemical
properties
protein length:1435 AA
molecular weight: 158435,84120 Da
isoelectric point:5,08967
aromaticity:0,07178
hydropathy:-0,42557

Domains

Domains [InterPro]
IPR053171
1–1158
IPR053171 IPR015406
IPR055385
85–208
IPR055385 IPR032876 IPR055383 IPR057587 Coil Coil
QPB12521.1
1 1435
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Providencia phage PSTCR8lys
[NCBI] 		2783551 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPB12521.1 [NCBI]
Genbank nucleotide accession
MW057859 [NCBI]
CDS location
range 35793 -> 40100
strand +
CDS
ATGGGTAAGGGTGGCGGCAAACAGCATACTCCGTATGAAGCGCCAAACGATTTAACATCACGACAAAAGTTATCAATTATTGACCTTGTGAGTGAGGGGCCAATTGAAGGGCCGGTCGGTGATTTGCAGGGAGTATTCTTAAATGATACGCCTGTTATTGATCAGTCAGGAAACAGTAACGTTAATGGAATGACGGCTCAATGGGTTTCTGGAACACTGGAGCAACCACCGTTAGAGGGCTTTGCTTCTTCATCCAGTGAGACCCCCGTGGGGGTAGAGGTGAAAAAAAGCACCCCCGTTACTCGCACGATCACATCACGAAATATTGACCGGCTTCGTTTAACGTTTGGCACACAGGCACTTGTTGAAGTTAAAGATAACGGGGATCGTGTTGGCACTTCTGTTGAGTTACAAATTCAAGTGCAACGCAATGGCGCTTGGGTGACAGAAAAAAATGTCACTATCCGAGGAAAAAGAAGTAATTCACCTTATTTGATGGCGGTTGTTATTGATAAATTACCACCGCCGCCATTCGGTGTACGCATAGTCAGGATCACGGAAGACAGTACAAGCGATAAGTTACAAAACAACACCATGTGGTCAAGTTATACTGAGATCACCGATATCATTCAAACCTATCCCGGCTCTGCGGTTGCAGGGCTTACTTTTGAGAGTGAGCAATTCGGTAACCAATTCCCACGCCGCAACTATCTTGTTAAAGGGCGCATTATTCAAGTGCCTGATAATTACGATCCTGAAACGAGAACTTACTCCGGTATTTGGAGTGGCGTTTTTAAACCAGCATATACGAACAATCCGGCGTGGGTGCTACGAGATCTTTTAACCCACCCGATCTATGGAATGGGTAAGCGGCTTAATATTGCCATGATTGACAAGTTTGCTCTCTATGTCATTGCTCAACATAATGATCAGTTGGTGCCTGACGGCTTTGGCGGCAAAGAGCCTCGAGCGACCTGCAACGCTTACATTACCGATTTGCGAAAAGCTCATGACGTCATCAGTGATCTCTGTTCAATGATGCGCCTCATGCCTGTGTGGAACGGGCAGCAAATGACATTTGTTCAAGATCGTCCGAGCGACACAGTGTGGCCATACACAAATGCCAATGTCATCAATGGTCGATTTAACTACAGTTTTAGCCCATTAAAAGCACGTCATAATATTATCGAAGTGCGGTTTATTGACCCATCCAACGGATGGAAAACCAGTATTGAGCTGGTTTCTGATGATGCATTAGTTGCTAAATTTGGCCCTAATGTTTTAAGGGTGGATGCGTTTGGTTGTACCAGCCGAGGTCAAGCCCACCGGTATGGCTTATGGATCTTAGCCACGGAAAGATTGGAGTCTCAAACCGTTGATTTTAGTGTTGGCGCTGAAGGCCTACGGCACTTACCCGGTGATATTATTGAAATTATGGATAATGACTGGGTTTCTGAGCAAGTTGGTGGGCGTTTGCTTGCTATTGATGCTACTCAGAAAATATTCACATTAGACAGAGAAGTGACCCCACCAAAATCCGGTACCGCTATGATCTCGGTAATTAATGGCGCAGGAAAGCCGGAGCGCGTTAAAATTACAAGCTTCCTATCCGACAACCAGATAAAAGTTGAACAAATGCCAAAAGGGGTCAGAGCTAAAGGCATTTGGGCGATAGCGCAACCTAATTTAGCAAGACGGCTATTTAGGGCAATGACCGTTTCTGATAATGGGGATGGCACCTATGCGATTACAGCGGTGCAGCATGTTCCAGAGAAAGAAGCGATTGTTGATCAAGGGGCTAAATTCGAACCGCTGCCTGATACGCCTTTGGGTGGGTATTTACCCCCAGTTGAAAACCTTTCAGTTGAAGTTAGTCCAGATAATGAAAGCTGGCAAGTTGAGGCGCACTGGACGACATCAGCCTCTGTACGTGGTGTTGACTTTCTTCTTAAGCTGACCCAAGCCGATCGCATTGTTGGTACCGCGAAAACATCGGATAACTTTTATCGCCTAGGTGGCTTACCCCAAGGTAACTATGTTTTGTCAGTGGTACCACAAAACAAAGAAGGGCAAAAGGGGGAGCAATCATCAGTATCATTTGATATTAACCCACCGCCACCGCCGTCTTACATTGATGTTGAGCCGGGCTTTTTTAGCCTAGGGGTTATCCCTCACGTTGGCGGTCAAAATGCCCTGCGCTTGCAATATGAATTTTGGTTTTCTGAGAAGCAGATACAGAATATCAATGATGTTGAGTATCTAGCGGAATACCTCGGTAGCGGTACGATGTGGGTTATTCAAGGAAGAAAGCTTAAAGCTGGCCAGACATATTATGTTTATGTCAGAACTGTAAACCCAGTGGGCAAATCGCAGTTTGTTGAAGCTAGCGGCAAGCCAGAGGATCGCGCTGATGAAATACTGGAAGTTATTGGCGACACCTTCCTCTCCACCGAAGCAGGCAAGCAGATGCAGGAGCAGATTGACTTTAGCAAAGAAGCGATTGCAGAGCTTGAGTTGGACACGATTGATGTGAAGCAGAAAGTTGTCAGCATTGACAGAGATGTTGAAGCGGTCAGCGAAGCAGTAATGATGAACACTCAGTTCACTACAGAATTACATTTTAGTTTGAAAGAAGAAGTTGCTGATAGAAAAGCTGAGATATTCCGCATTGAGCAAGTGCAAGTCACTGACAGAGAAGCCGCTGCGCGCTGGCAAGAGCAAATCACCGCAAAAGTCGATTATAACGCATCTGAAATCCTGAATATTAAGGATGCTCAGTCGAGTTATGAGAAAGCAACAGCGCAGCAAATCAGTCAAGTTAAAGCGGAATTAGGAGAGACAAATAAAGAAGTTGGTGACATCAAAGGTCGTGTTACTACAGTCGAAACAGCGACAGTTGACTTGAAGCAAGCGCAAGCGAAGTTTGAACAATCAACAACGGCTCAGTTTGGTGAAATGCGCGGCTACATTACTAACATTGAAACGTCACTGACTAACATCGAGTTTGCAGTATCAGAAGCGATTATGCAGACAACTGCACAAGTTAATGAAACTAACTCAGAGTTACTGAAAACGAAAGCAGAAGTCACTCGACTTGCAACAGCGACGGCAACAAATGAAAAAGCTACTGCACAATTAGTTGAAAGTGTAAAAGCACAACATGATCAGTCAGAAGCTGAATTTATTGATGTGCGTAAATCAATCGCAGAGAAAGACAAAGCACAGTCAGAGCGCACAGAACAAGTGCGCGCAGAGCTTGAAAAAGATATCAACGCTAACAAAGAGGGTATTGATAAAAACAACAATGAGCTATCGAAAGTTAGTGCTGCTGTGACAAACAATACACAGTCAATCGCAACACTAGAAGAAACGACAACTCAGATTAAGCAAACTCAACAAAGTCAGCATGAAGATACAGAAGCTAAAATCGGCAAGCTATCTGAAACAACAGCAAGCAACACGGAAGCGATAACGGAAGTCAAAGAGCAGAGTCAGTCTCGCTTTGAAAGCAATGAAGCGACGATTGCAAACATGCAGCAAACAATTGCTAATGCTGAAAGCTCACTGTCTGAAATGGGTATGCAGTTGACTGCGGAGGTTGGAAATCAAGCAATTGAGCAACTGAGAATTAAAGCGTCAATTACTCGTTTAGATACAGTAACAGCTGACAAGTTTCAGGCATTCGCACAGTCATTCGAGAAAATTGAAACTCAATTCAATGATGTCAATTCAAGTATTACAACTCTCAAGAAAACTGTATCCGACAATGAGAAATCACAAGCTGAAACTAATCAGTTAATTATGTCTGAAATTGGAGATAACAAGTCAGCAATTGAACTTCGTGGTCAAACTATTTTCGATCACCAAGGGAATGGCTCTGCTATCTACACAATCAAGACCGGCATTAATTGGAATGGTCAATATTACGATGCTAAATTCATGATGGGGGCGACTGTTCAGAATGGAAAAGTAGTGACTCAGATCGGCTTTAGTGCTGATACGTTTGGTATTTTCAATCCATCTAGCGGTAAATTGGAACCCGTTTTTTTCGTTGAGAATGGACAGGTCTTTATCAATGAAGCGTTTATCAACAAAGCTACAATTGAAAAAATCATTGTGGGTACAGATATGCGCTCTAAAAATTATGTCGCAGGGAAAACAGGGACACGGATTGATATGAATAACGGGGCTATTGAAATAAATGGAAGCGACAATAATGGGTCACGCATGACGCTTAAAAACGACCAACTTGCAGTATTTGGAGGAAATAAACCTAAGGTAATTATTGGAAGGTTGTATGGAATATGA

Tertiary structure

PDB ID
6a99d9432978460a1e6d166f8074cf3e29dbfe6d18744ab93c380c032ebf5ea9
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7385
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel bacteriophages targeting Providencia spp. as potential agents for phage therapy Rakov,C., Alkalay-Oren,S., Coppenhagen-Glazer,S. and Hazan,R. 2021-04-02 — GenBank