Protein

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Genbank accession
YP_010082185.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,75
Protein sequence
MIYILDRFARNVVAVLTNTSPKACPYWDDAHTEQLDTGYLSYSFRCPADHPTAEFLRAENHVLIRDLDGIYILFQIKTVEDAIDNGQHTKRVQAENAAVGDLYGTIIRPTVQNGITARQALTYALQASGWLPGQIDWQGIETFDWQDYPTALAAIQDIGRKFSGELRFRVEFANGAVGNRYVDLTKRGRVTGVRFDYGRNMRGIKRTEDSSDMVTALIGVGKADENGVRMTFTTQKWDETDEHPAKPIGQDFIADPDALQKWGRADGRHIIGVYEDNNADNPLVLMRNTWEELKKRNRPRLTYELDAVLLESLTGYEHTKVRLGDTIVVKDMSFVPYLAVEARVIELVRSYADPSQDKVTLGEFKPLDIQSNELIRRLSDIISRNSGKWEAIGDGEQIYKGPTPPANPAKDTIWLDTSVEPNVFRRYDGKAWVAASPTKPGDIGAETPQGAQDKANKVKDDVANGRISIPADSLKGIMDVARTKIRQGSNMYWDSGGLVMVNPNNANERVRLSSGGIGVSTNGGASYQTAMTGAGVVAERIVGNVISGVTLSGVNLTTSKDIRVGNRIYLGTAGGGEKSLVFNENRGVGIYGGGGQYGSDISLQGNGLNLRVDRVFFGRNAKTEYTQDRFTLRNNSQASAVLSSRQRLGPKSWTRVNFNEAYADNWNEFNRSANRFVVGMDGTYLVQLSLGFNLEDTHNGPHRVSMAVYKNGTQYSQVFYTTYANDVLIATGTCIIYGAKRGDYIEGHAYTTSLSAYISADSKISAMKIWRLG
Physico‐chemical
properties
protein length:773 AA
molecular weight: 85448,76100 Da
isoelectric point:6,83144
aromaticity:0,09056
hydropathy:-0,42497

Domains

Domains [InterPro]
DC_1956
STR
1–570
DC_1956 DC_1224
IPR007119
Unmapped
29–362
IPR007119 IPR008983
IPR010572
ENZ
113–366
IPR010572 IPR008983
YP_010082185.1
1 773
Architecture
STR
STR
STR 1-570 | STR 595-771 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010082185.1
1 773
Domain Start End Length (AA) Confidence
N-terminal 1 558 558 0,9935
Central domain 559 757 200 0,2810
C-terminal 758 773 15 0,9966
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-558
Central
559-757
C-terminal
758-773

Taxonomy

  Name Taxonomy ID Lineage
Phage Paenibacillus phage C7Cdelta
[NCBI] 		2249773 Uroviricota > Caudoviricetes > Halcyonevirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010082185.1 [NCBI]
Genbank nucleotide accession
NC_055028 [NCBI]
CDS location
range 14788 -> 17109
strand +
CDS
GTGATATACATTCTCGACAGATTTGCTCGAAATGTTGTGGCGGTCCTGACGAACACAAGCCCGAAGGCGTGCCCGTACTGGGACGACGCACACACCGAGCAACTCGATACCGGATACCTAAGCTATTCATTCCGATGTCCCGCCGATCATCCGACGGCGGAGTTTTTGCGTGCCGAAAACCACGTTTTGATCCGCGACCTTGACGGCATCTATATCCTGTTTCAGATCAAAACGGTAGAGGATGCGATAGACAACGGCCAGCATACGAAAAGAGTGCAGGCCGAAAACGCAGCAGTCGGCGATCTATACGGCACAATCATCCGCCCGACTGTACAAAACGGTATTACCGCCCGGCAGGCGCTGACATATGCGCTGCAAGCAAGTGGATGGCTACCGGGCCAAATCGACTGGCAAGGCATTGAAACGTTTGACTGGCAGGACTATCCTACGGCACTCGCAGCCATACAAGACATCGGCCGCAAGTTTTCGGGTGAGCTCCGGTTCCGCGTCGAATTTGCGAATGGTGCGGTTGGAAACCGTTACGTCGATCTGACCAAGCGCGGGCGAGTGACGGGCGTCCGTTTTGACTATGGCCGGAATATGCGGGGGATCAAGCGTACCGAAGATAGCTCCGATATGGTAACCGCACTGATTGGCGTGGGCAAGGCCGATGAAAACGGGGTTCGGATGACGTTTACCACGCAAAAGTGGGACGAAACCGACGAGCACCCGGCCAAGCCGATTGGGCAGGACTTTATCGCAGACCCAGACGCGTTGCAAAAGTGGGGGCGTGCGGACGGCCGACACATAATCGGTGTTTACGAGGATAACAACGCAGATAATCCACTTGTTCTTATGCGTAACACGTGGGAGGAGCTTAAGAAACGGAACAGGCCGCGCCTCACCTACGAACTCGACGCTGTCCTACTCGAATCCCTGACCGGGTATGAACATACAAAGGTAAGGCTCGGGGATACCATCGTCGTCAAGGACATGAGTTTTGTACCATATTTAGCCGTCGAAGCCCGCGTCATAGAGCTTGTGCGCAGTTATGCCGACCCGTCACAAGACAAGGTGACGCTGGGAGAGTTTAAGCCGCTCGACATCCAGAGTAATGAGTTAATACGGAGGCTTTCCGATATCATTTCGCGCAATTCCGGTAAGTGGGAAGCTATCGGCGACGGTGAGCAAATTTACAAAGGCCCGACACCTCCCGCCAACCCGGCGAAAGATACCATTTGGCTGGATACTTCGGTAGAGCCAAACGTATTCAGACGCTATGACGGTAAAGCTTGGGTTGCGGCCAGTCCGACCAAGCCGGGCGATATCGGAGCTGAAACGCCGCAAGGCGCTCAAGACAAAGCTAACAAAGTCAAGGACGACGTAGCTAACGGGAGGATTAGCATTCCTGCGGACTCCCTAAAAGGGATCATGGACGTTGCCCGAACGAAAATCCGGCAAGGCTCTAACATGTACTGGGATTCAGGCGGCCTCGTCATGGTCAATCCGAATAATGCTAACGAGCGTGTGCGGCTGTCATCCGGCGGCATCGGCGTAAGCACCAACGGCGGGGCATCGTACCAAACGGCCATGACCGGTGCCGGAGTCGTGGCTGAGCGGATTGTCGGAAATGTAATCTCGGGAGTCACGCTGTCTGGTGTTAACCTGACGACATCCAAGGACATTCGGGTCGGCAACAGGATTTACCTCGGTACTGCGGGAGGCGGCGAAAAGAGCCTAGTTTTCAACGAGAATCGAGGCGTTGGGATATACGGAGGCGGCGGACAGTATGGCTCGGATATATCCTTGCAGGGAAACGGCCTAAATCTCCGTGTAGATCGCGTGTTTTTTGGACGCAATGCAAAAACGGAGTATACGCAGGACCGGTTCACGCTCCGAAATAACTCGCAGGCATCTGCGGTTTTGAGCTCAAGGCAGCGACTCGGACCAAAGTCATGGACGAGGGTAAATTTCAACGAAGCGTATGCGGATAACTGGAACGAGTTTAACCGGTCCGCAAACCGGTTTGTCGTAGGTATGGACGGTACCTACCTTGTCCAACTGTCGCTTGGATTTAACCTTGAGGACACACATAACGGGCCGCATCGGGTATCCATGGCCGTATATAAAAATGGAACGCAATACTCTCAGGTATTTTACACCACCTACGCAAATGACGTTTTGATAGCTACGGGTACCTGTATTATATACGGAGCCAAGCGTGGTGATTACATTGAGGGACATGCGTATACCACTAGCCTGAGCGCGTATATCTCGGCAGATTCGAAAATATCTGCAATGAAAATATGGCGGTTGGGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
3b2babe180b269749234eeecc223cca3e05584874153340e0766f3e40eab4319
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7700
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50