Protein

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Genbank accession
YP_009097868.1 [GenBank]
Protein name
long tail fiber protein distal subunit
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,76
TF
Evidence RBPdetect2
Probability 0,85
Protein sequence
MADLKLGTTLGGAAIWSASNLPLLPSGGQITYKGWRIYTENDRPTAEDIGALSLANGGTVNNDATFTKNITVGINAVVGALFSRSYIDITRAGNDPNIVFRRSDVTTTPTTEQALLVINAMNGVNVTAGTFNVHARPDGGNKVYITAYKSGSQNTALTLDSQTQQVTVEQGTFRVMGNTVLAGTTATTMAVTGALTAQTVTPANWTNHDVRYMTGIPTNMQGNTLSAAVVTEKNDVLSVNGSIVDGPYGNNTYNGQVVNFRRTLNTGNALTQIYLDNGVFHIRSGSGSPGAWSWVGGNANGWRKIYDENNKPTPVEIGALKNTTDTLNGELGLIGDLSLKSPTNRHIKFVYTKNDGSQTVDGYIYKDGPDAANRRSGIRINCYTPNKATGNGEFSGEFIFNENGSFILPSGGTIYQEGMTPGLYANSILSSAASGAKQYLRKFRGGGPDTIWHETVHTNIYRLATGVNDDVEVMVLDDSGNMSIKGHAGESTNLYLDSNINSVVWFRNSNGTEKGAVWAESDGKLKIRTNHTFSNTWEYYAGMIHSTGAVSGTDRGIIRGTPDGGGWDQWRERSAAVSVDVPGVNNSAYSIWKATSWNNTYVAAMDVHMPNFTPGATRVRLVLQSSVAFYFDGDGSFTTSTGNITAGANGFFNDVYIRSDEKLKSNFSKIENALDKVELLDGLVYDKSNHIGGEPVTREAGLIAQQLQKVLPEAVSVGKDTKENEILTISPTATIALLVNAIKELREEVRELKARK
Physico‐chemical
properties
protein length:756 AA
molecular weight: 81290,44780 Da
isoelectric point:6,06184
aromaticity:0,08201
hydropathy:-0,33228

Domains

Domains [InterPro]
DC_0505
ATT
1–303
DC_0505 IPR030392
DC_0406
STR
255–756
DC_0406
IPR030392
CHP
659–715
IPR030392 Coil
YP_009097868.1
1 756
Architecture
ATT
STR
ATT 1-303 | STR 304-756
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009097868.1
1 756
Domain Start End Length (AA) Confidence
N-terminal 1 150 150 0,2803
Central domain 151 349 200 0,1855
C-terminal 350 756 406 0,8429
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-150
Central
151-349
C-terminal
350-756

Taxonomy

  Name Taxonomy ID Lineage
Phage Citrobacter phage Miller
[NCBI] 		1527524 Uroviricota > Caudoviricetes > Pantevenvirales > Pseudotevenvirus > Pseudotevenvirus miller
Host Citrobacter
[NCBI] 		544 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae >
Host Citrobacter freundii
[NCBI] 		546 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009097868.1 [NCBI]
Genbank nucleotide accession
NC_025414 [NCBI]
CDS location
range 169124 -> 171394
strand +
CDS
ATGGCTGATTTGAAATTAGGTACAACGCTTGGTGGCGCTGCTATCTGGAGTGCGTCAAACCTTCCGTTATTGCCGTCAGGTGGACAAATAACGTATAAAGGCTGGCGTATCTATACAGAAAATGATCGCCCCACAGCAGAGGATATAGGGGCATTATCACTGGCTAACGGTGGTACGGTTAATAATGACGCGACATTCACAAAAAATATAACCGTTGGTATTAACGCTGTTGTTGGTGCGTTGTTTTCCAGATCGTATATTGATATTACTCGCGCCGGAAACGATCCGAATATTGTTTTTCGTCGCTCAGACGTTACTACTACACCAACAACAGAACAAGCCCTTTTAGTAATTAATGCTATGAATGGGGTTAATGTTACTGCTGGTACATTTAACGTTCATGCGCGACCTGATGGTGGTAATAAGGTTTATATTACTGCATACAAATCGGGTTCGCAAAATACCGCACTGACTCTTGATTCACAGACACAACAAGTTACTGTTGAACAGGGAACTTTCCGAGTTATGGGAAATACTGTTCTTGCTGGTACTACCGCAACAACAATGGCAGTCACTGGGGCATTAACTGCACAGACGGTAACTCCGGCAAACTGGACAAACCATGATGTCCGTTATATGACGGGTATCCCGACCAATATGCAGGGGAATACACTAAGTGCTGCGGTTGTCACTGAAAAGAATGATGTTCTGTCAGTAAACGGAAGCATTGTTGATGGGCCTTACGGGAATAATACGTATAATGGTCAGGTTGTCAACTTCCGGCGCACGTTGAATACGGGTAATGCTCTTACTCAGATTTATCTGGATAATGGTGTATTCCATATTCGTAGCGGTTCTGGATCTCCCGGTGCGTGGTCGTGGGTTGGTGGTAATGCTAACGGCTGGCGTAAGATTTATGACGAAAACAACAAACCGACTCCGGTAGAGATCGGCGCATTGAAAAACACAACCGATACTCTGAACGGTGAACTGGGATTAATTGGCGATTTATCTTTAAAATCACCAACAAACCGTCATATTAAATTTGTATATACTAAAAATGACGGAAGTCAAACAGTTGATGGTTATATCTATAAAGATGGGCCTGATGCAGCTAACCGAAGATCTGGTATCCGTATTAACTGTTACACGCCAAATAAAGCTACGGGAAATGGTGAATTTTCAGGGGAGTTTATTTTCAATGAAAATGGTTCGTTTATTCTTCCTTCTGGTGGTACGATATATCAGGAAGGGATGACTCCAGGACTTTATGCAAATAGTATTTTAAGTTCTGCTGCAAGTGGTGCTAAACAGTATCTACGTAAATTCCGTGGCGGTGGACCTGATACCATTTGGCATGAAACTGTTCATACCAACATATATAGGTTAGCGACAGGTGTCAATGATGATGTAGAAGTCATGGTTCTTGATGATAGCGGGAATATGTCCATAAAAGGACATGCTGGAGAATCGACTAACTTATATCTCGATAGTAACATCAACTCTGTTGTTTGGTTCCGTAATTCTAATGGCACGGAAAAAGGTGCTGTCTGGGCAGAAAGTGACGGCAAACTGAAAATTCGTACTAACCATACGTTCTCGAATACATGGGAATACTACGCTGGGATGATACACTCGACAGGCGCTGTATCAGGGACTGACCGAGGTATTATTCGTGGTACTCCTGATGGCGGTGGTTGGGATCAATGGCGTGAACGTTCTGCTGCGGTATCTGTTGATGTTCCTGGAGTAAACAACTCCGCTTATAGCATATGGAAAGCAACTTCATGGAACAATACCTATGTTGCTGCTATGGATGTTCATATGCCTAACTTCACACCAGGCGCAACTCGTGTTCGTCTTGTTCTGCAAAGTTCGGTTGCTTTCTACTTTGATGGTGATGGTAGTTTTACAACATCAACTGGTAACATCACAGCGGGTGCAAACGGATTCTTTAACGATGTGTATATTCGTTCTGATGAAAAACTGAAAAGCAATTTCAGCAAAATCGAAAACGCATTGGATAAAGTCGAACTGCTTGATGGTTTGGTTTATGATAAATCAAATCATATTGGTGGTGAACCTGTTACCCGTGAAGCTGGTTTGATTGCACAGCAACTGCAAAAGGTATTACCGGAAGCGGTATCTGTTGGTAAAGATACCAAAGAAAACGAAATATTGACGATTTCCCCGACTGCAACGATCGCACTACTGGTCAACGCAATCAAAGAACTTCGTGAAGAAGTAAGGGAACTCAAAGCCCGAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b35e0f4fbcb447a6307bffc140f47839b9c1455f5770652162d2ecc8110a5ce2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6098
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50