Phage RBP Database

Genbank accession

UPI12599.1 [GenBank]

Protein name

hypothetical protein

RBP type

TSP

Evidence DepoScope

Probability 1,00

TF

Evidence RBPdetect2

Probability 0,80

Protein sequence

MALSGTISTSVRTHWKLSVSWSATQSVSNNTSTITAKMYWEAVDGYGAVYSNVSKSGSIYIDGTWYNFSGAGLARLSPNQKKLIATKSKTVKHNADGTKSFSLGGWFNPDVDLGGHQGKISLSNKTFTLNTIPRKSTMSSGGDFTAGSDRTISISRASSSFSHKLYIDIKDSGGNWVNIKSINFSKSETSKSTSFSTDEKKTIFRAIDERSSAQVRYNLHTLSGGNDIGYNTYYGNANRPKLSVVNKLNGQAGSSNSVYIDQSLTIDLTRYDSEFDHKVQVICGSFTKEFNGVGYTQSWTPTASEQSTLYGILNNVISKSATVRVYTYYNGVRVGSTDYGMTYYVRSSNNKPTFTDAGIFYTDTNPTTLNITADDQYIIQGVSTLRVEIPVESKAVAVNGATMKSYSITVNGVTKNVNYSSTGTVSADFGTINSASNATVSIKAIDSRGLSTAVTKVVKIVPYAYPSVSTTAKRTNGYERTTTLTLRGGLSPIAVNGSNRNALESARYRYKLTDATTYGSWNNFTVTGFPSYSATNVSLDLDENETWDVQVEVSDSLGVTTKTISVSAGRPIMFLDAQRKAVGIGDFPSNEYELKINGRIVFGATLWASNGGGEGFGAIDLNNSDISNANAIYFADVAQNMNGEGLMFFKSGSPYGSSDPTHYDNLMVRDGVLYLNADGSEMGVGNHLHMRNHDIRNVNHITINDPGGNEGIEWLGGSGWKIVEAPNDLSNVGGPLQFATGNSRKITFSTSGNIYLAGGTFKGESGGYTYFASAAQACLTSDAPGGASIRVHVDGAGGRVWSNDIYNRTYDKAPNVYITTEGTLGRSTSASKYKVFIKKVDTELLPSKILKLNPKSWYNKTAVELYADQLGTPEDDLESGEEVEEDIPFIERSYGLIAEDLVDAGLDMFVSWGKADENGQREVEGIEYDRLWVLLIPLVREQKQQIEELQERIAQLELSN

Physico‐chemical properties

protein length:	960 AA
molecular weight:	104229,21340 Da
isoelectric point:	5,87513
aromaticity:	0,09792
hydropathy:	-0,37781

Domain architecture

UPI12599.1

1 960 aa

STR 23–237 · STR 254–600 · CHP 829–953 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR008577
STR

IPR008577 IPR008577 IPR030392

IPR008577
STR

IPR008577 Coil

UPI12599.1

1960 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1676
ATT

DC_1676 DC_0284

DC_1334
RBD

DC_1334

UPI12599.1

1960 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR008577	STR	DC_0504	23	237	InterPro cluster	Putative viral structural protein (DUF859)	Central	Low	Positional only	87 proteins / 142 hits
IPR008577	STR	DC_0504	254	586	InterPro cluster	Putative viral structural protein (DUF859)	Central	Low	Positional only	87 proteins / 142 hits
IPR008577	STR	DC_0504	254	600	InterPro cluster	Putative viral structural protein (DUF859)	Central	Low	Positional only	87 proteins / 142 hits
IPR030392	CHP	DC_0088	829	953	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits
Coil	Unmapped	-	939	959	Coils	Coil	-	-	-	-

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

UPI12599.1

1 960 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	139	139	0,0007
Central domain	140	384	246	0,7752
C-terminal	385	960	575	0,5771

Note: Constraints were applied during segmentation.
Fixed 124 C-terminal predictions appearing before Central domain

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Bacillus phage SBSphiJ4 [NCBI] · taxon 2930341

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host

Bacillus subtilis BEST7003 [NCBI] · taxon 1204342

Bacillota Bacilli Bacillales Bacillaceae Bacillus Bacillus subtilis BEST7003

Genbank protein accession

UPI12599.1 [NCBI]

Genbank nucleotide accession

OM982671 [NCBI]

CDS location

range 69097 -> 71979
strand +

CDS

ATGGCGTTATCAGGAACTATATCTACGTCCGTTCGTACTCACTGGAAGCTATCTGTAAGCTGGTCAGCTACCCAGAGTGTATCAAACAACACGAGTACGATCACAGCAAAAATGTACTGGGAAGCTGTAGATGGATATGGGGCAGTTTACTCCAATGTATCGAAAAGCGGTTCTATTTACATTGACGGTACTTGGTACAATTTTAGCGGGGCAGGTCTAGCGAGACTTAGTCCAAACCAAAAGAAGCTAATTGCAACAAAATCTAAAACAGTAAAGCACAACGCCGATGGTACAAAGTCATTTAGTTTAGGTGGTTGGTTTAATCCTGATGTAGACCTCGGAGGGCACCAAGGGAAGATCAGCCTTTCAAACAAGACGTTTACACTAAATACAATCCCACGTAAATCTACAATGTCCTCTGGAGGAGACTTTACAGCGGGAAGCGACCGGACAATCTCAATATCCCGAGCATCATCTTCGTTCTCCCATAAGCTGTATATCGACATTAAAGACTCTGGAGGAAACTGGGTTAATATTAAGTCCATAAACTTCTCTAAATCGGAAACATCTAAGTCTACATCTTTCTCGACTGATGAAAAGAAGACGATATTCCGAGCCATAGATGAAAGGTCTTCAGCGCAAGTAAGGTATAATCTACACACGTTGAGCGGTGGGAATGACATTGGATATAACACATACTACGGGAATGCGAACAGACCTAAGCTAAGTGTAGTTAACAAGCTCAACGGTCAAGCAGGCAGCTCTAATAGTGTATATATCGACCAGAGTTTAACAATTGACTTGACTCGATATGACAGCGAGTTCGATCATAAGGTGCAGGTCATCTGCGGATCGTTTACCAAAGAGTTTAATGGTGTAGGATACACACAGAGCTGGACTCCTACAGCGAGCGAACAATCTACACTATATGGTATACTAAATAATGTAATCAGCAAATCAGCAACCGTGAGAGTGTATACATACTATAATGGGGTTAGAGTAGGGTCAACAGACTACGGGATGACGTATTATGTTCGGTCTAGTAACAATAAACCTACGTTTACAGATGCAGGTATATTCTATACTGACACAAACCCGACTACATTAAATATTACAGCAGACGATCAATACATAATTCAAGGAGTATCTACTTTGAGAGTAGAAATACCTGTCGAATCTAAGGCAGTAGCTGTTAACGGTGCCACAATGAAATCATATTCTATCACAGTTAACGGTGTAACTAAAAACGTAAACTATTCTTCGACAGGAACTGTATCAGCAGACTTTGGTACAATCAACTCGGCTTCTAATGCAACAGTGAGTATCAAGGCTATTGACAGTCGAGGGTTGAGTACAGCAGTGACGAAGGTAGTGAAGATTGTTCCTTATGCGTATCCTTCTGTGTCTACTACAGCTAAACGTACAAATGGGTATGAGAGGACAACAACTTTGACTCTCCGAGGGGGATTATCTCCAATCGCAGTCAATGGTTCCAACAGAAACGCCCTAGAGTCCGCAAGGTATCGTTACAAGTTGACAGATGCCACCACCTACGGAAGTTGGAATAACTTTACAGTTACTGGATTCCCTTCCTACTCTGCAACCAATGTATCTTTAGACTTAGATGAGAATGAGACATGGGATGTGCAGGTAGAAGTATCCGACTCTTTAGGGGTCACAACAAAAACGATATCTGTATCCGCAGGTAGACCAATTATGTTCCTAGATGCTCAGCGAAAAGCAGTAGGTATTGGAGACTTCCCTTCCAATGAGTACGAATTGAAGATCAACGGTCGTATCGTATTTGGAGCAACGTTGTGGGCTTCGAATGGGGGCGGAGAGGGTTTTGGAGCCATTGACCTCAATAATTCAGATATCTCAAATGCTAACGCTATATACTTTGCGGACGTAGCTCAAAACATGAATGGTGAAGGCTTAATGTTCTTCAAGTCAGGTTCTCCCTACGGTTCTAGTGATCCTACTCATTATGACAACCTGATGGTCCGAGACGGTGTACTTTACTTAAACGCAGACGGTTCTGAAATGGGGGTAGGTAATCATCTCCATATGAGGAACCATGATATCCGAAATGTTAACCATATCACTATCAATGACCCCGGAGGTAATGAGGGCATCGAGTGGTTGGGAGGCAGTGGATGGAAAATCGTAGAAGCACCAAATGACTTGTCCAATGTTGGAGGACCCCTACAGTTTGCTACAGGTAACTCTCGAAAAATCACCTTCTCTACATCAGGTAATATCTATCTTGCTGGAGGTACCTTTAAAGGGGAGTCAGGAGGATACACATATTTTGCGAGTGCTGCCCAAGCTTGCCTCACCAGTGATGCTCCCGGAGGTGCTTCAATACGAGTACATGTAGACGGTGCAGGAGGTCGTGTATGGTCAAATGACATTTATAACCGAACCTACGATAAAGCGCCTAATGTTTATATCACCACAGAGGGTACTCTTGGAAGGTCTACCTCTGCTAGTAAGTACAAAGTTTTTATAAAGAAGGTAGACACTGAGCTCTTACCTAGTAAGATTCTTAAGCTTAATCCTAAGTCTTGGTATAACAAGACCGCAGTAGAGCTGTACGCTGATCAACTGGGAACACCGGAAGATGATCTAGAATCAGGAGAGGAAGTAGAGGAAGATATTCCGTTCATTGAAAGAAGTTACGGTTTAATTGCGGAGGACCTTGTAGACGCAGGATTAGATATGTTCGTTAGTTGGGGTAAAGCAGACGAAAACGGGCAAAGAGAGGTTGAAGGGATTGAGTACGATAGACTATGGGTGCTCCTAATCCCCTTAGTTAGAGAACAGAAACAACAGATTGAAGAACTACAAGAAAGGATAGCTCAGTTAGAGCTATCCAATTAG

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)