Protein

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Genbank accession
AXY81504.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MNEMFSQGGKGSTGILTNKQAVARHFGVKQSEVVYFSVGVDLGGYKVIYDKETQRAYSLPADIAPGTTAISLSAAVLVHSAGSVDLGELAVYRDLKSNENAP
Physico‐chemical
properties
protein length:102 AA
molecular weight: 10764,98990 Da
isoelectric point:6,04582
aromaticity:0,07843
hydropathy:-0,06765

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–94
G3DSA:3.30.2020.50
AXY81504.1
1 102
Architecture
ATT
ATT 1-94 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXY81504.1
1 102
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0020
Central domain 11 91 82 0,0047
C-terminal 92 102 10 0,9930
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-91
C-terminal
92-102

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_vPM_PD114
[NCBI] 		2316019 No lineage information
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXY81504.1 [NCBI]
Genbank nucleotide accession
MH675927.1 [NCBI]
CDS location
range 83525 -> 83833
strand +
CDS
ATGAACGAAATGTTCTCCCAAGGTGGTAAAGGTTCAACCGGAATCTTAACCAATAAACAAGCAGTAGCCCGTCACTTTGGAGTTAAACAATCTGAGGTTGTTTACTTCTCAGTTGGTGTGGATTTGGGTGGGTATAAGGTTATCTATGATAAGGAGACGCAAAGGGCGTATTCCCTACCTGCTGATATTGCCCCAGGTACTACTGCCATTAGTCTTAGTGCTGCTGTACTTGTGCATTCAGCGGGTTCTGTAGACCTTGGGGAATTAGCTGTATATCGTGATTTAAAAAGTAATGAGAACGCACCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
e7302c0f1060cce9ca5f3268171948d22d3e650f82f09f45e20c150fcbccfe21
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3840
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50