Protein

View in Explore
Genbank accession
ATV25065.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence Phold
Probability 1,00
Protein sequence
MPLDSLKHHGDYRMTIIKRTDVGRPLTWDELDDNFRQVDDLTAAASAAVSSASVSATAAAGSAVASANSATDAANSAANAAQSAAQAEEYANNASDYAQNKFTFYKTSSDPDGTIAGLAATTDGQSFWVAQGPDALSAAWQYQNNAGVAVLQAKQPGTAAITGTIREFTTLAAAQADADAGNIPVGSTAYYRSPDAAELAVEVINNAGTLVPTGRKMLATAAVENLLPLNETTKFKTVDEGEYEFGLKFDTVTVDSINNVLYYISEGKLYNLLNSLFNYINTKILLVDGVEVDPAGILDVSDKDNVESLGETTTFSTLDNEGEYEFGPQYDTVTLDSQGNVMWFSKGRQLYSLLAGNFPELFINGIEMDPAGILPAGDKTNLTALSETTNYTSGGDEFEFNQKPYVLTDEQKNILFDVLDYINRSVNWDIAYERTQNIQPQKINPLLPWSDVDSGGKFQVFVLDNEVGEQIQVTDGTSNETNPRPDALDRIVWQSDQADPPPGGLFYAQLPEFTPHAYIARKKIVGWGHSFINNGAFFNRLRALTNLPLYNFGLAGQTSDAIAARQGGAPAYYAPVGGSIPASGTVTLTPALPGPCRSLAAPVALKSNLAGVDGVFTWDGTNAVFTRDAAGSVVPVSVQTPLFVYPITTVNVSGSISSGTQFDLHDECINIFWIGRNNLSQTDLIMENLISMVEYVKNIGQKIVILAEFNSSGEPTGSTGFNQMTELNRRYKEKYPEFYCEINGVDILQNFINNANPNSPDDMSDVAAGLTPRSLRYDNLHPSQQISGNGGSLTPEFALDYGANVNANFVYQFLMNKGWL
Physico‐chemical
properties
protein length:820 AA
molecular weight: 88454,97030 Da
isoelectric point:4,35832
aromaticity:0,09756
hydropathy:-0,22317

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage PEAT2
[NCBI] 		2053078 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ATV25065.1 [NCBI]
Genbank nucleotide accession
MG432137 [NCBI]
CDS location
range 45174 -> 47636
strand +
CDS
ATCCCGCTGGACAGCCTCAAACATCACGGTGACTATCGTATGACCATTATCAAACGCACAGATGTGGGTCGGCCCTTAACGTGGGACGAACTGGATGATAACTTCCGGCAGGTTGATGATTTGACAGCCGCCGCATCTGCAGCTGTATCAAGTGCGTCGGTGTCCGCAACAGCCGCCGCCGGTAGCGCTGTAGCATCGGCAAATAGTGCAACAGATGCTGCTAACTCCGCAGCTAACGCAGCTCAGTCAGCAGCACAGGCTGAAGAGTATGCAAATAATGCTTCCGACTACGCGCAGAATAAGTTTACGTTCTATAAAACCTCAAGCGACCCAGATGGCACCATTGCAGGGCTGGCAGCAACGACCGACGGTCAGTCGTTCTGGGTAGCTCAGGGTCCGGATGCACTTTCTGCTGCATGGCAGTATCAAAACAATGCTGGCGTGGCCGTGTTACAGGCAAAACAACCAGGAACAGCGGCTATAACCGGGACCATCCGCGAATTTACGACGCTGGCGGCGGCACAGGCTGACGCAGACGCCGGAAATATACCGGTTGGGTCAACAGCGTACTACCGCAGCCCTGACGCTGCCGAGCTTGCTGTTGAGGTCATCAACAATGCAGGTACGCTGGTACCAACCGGCCGGAAAATGCTTGCTACCGCAGCAGTAGAAAATCTTTTACCGTTAAATGAAACGACTAAATTCAAAACAGTTGACGAAGGTGAGTATGAGTTTGGGTTGAAGTTCGATACTGTTACTGTCGATAGCATTAATAATGTTTTGTATTATATATCAGAAGGAAAGTTGTATAACCTTCTTAATTCGTTATTTAACTATATCAATACTAAAATATTGCTGGTCGATGGGGTCGAGGTCGACCCTGCCGGGATTCTTGATGTAAGCGATAAAGATAATGTAGAGAGTCTCGGAGAGACGACCACTTTCAGCACTCTGGATAATGAGGGTGAATATGAATTCGGTCCACAATACGATACCGTAACACTGGATAGCCAGGGGAATGTCATGTGGTTCTCAAAAGGGCGGCAACTTTATAGTTTACTGGCCGGGAACTTCCCTGAGCTGTTTATTAACGGTATCGAAATGGACCCTGCCGGGATTCTGCCGGCTGGGGATAAAACCAATCTTACAGCTCTTAGTGAAACAACAAATTACACATCGGGCGGAGATGAATTTGAGTTTAACCAGAAGCCCTATGTTTTAACTGACGAACAGAAAAACATTCTGTTTGATGTGCTGGATTATATTAACCGGTCAGTTAACTGGGATATCGCATATGAGCGCACACAGAACATACAGCCGCAAAAAATTAACCCGCTGCTGCCGTGGTCGGATGTCGATTCAGGCGGTAAATTTCAGGTTTTCGTTTTGGACAACGAGGTCGGAGAGCAAATCCAGGTTACTGACGGGACAAGCAACGAAACTAACCCTCGCCCTGACGCGCTGGACAGAATTGTATGGCAGTCTGACCAAGCCGATCCGCCACCGGGAGGATTGTTTTACGCACAACTGCCGGAATTTACGCCGCATGCATATATTGCACGTAAAAAAATCGTGGGATGGGGTCACAGTTTTATCAACAACGGCGCTTTCTTTAACCGGCTAAGAGCGCTGACGAACCTACCGTTGTATAACTTCGGCCTAGCAGGGCAGACCAGCGACGCCATAGCAGCACGTCAAGGCGGCGCTCCGGCGTACTATGCACCGGTAGGAGGATCAATCCCGGCTAGCGGCACGGTAACTCTTACCCCAGCATTACCGGGTCCATGCCGCTCCCTGGCGGCCCCTGTAGCGCTAAAGAGCAATCTTGCTGGGGTTGATGGGGTGTTCACGTGGGATGGAACTAACGCAGTATTTACGCGTGATGCCGCAGGTAGCGTAGTTCCAGTTTCAGTGCAAACACCTTTATTTGTGTACCCGATAACAACTGTGAATGTCAGTGGAAGTATCTCATCAGGCACGCAGTTTGATTTACACGACGAGTGTATAAATATTTTCTGGATTGGACGGAATAACCTTAGCCAGACTGACCTGATTATGGAAAACCTTATTTCCATGGTCGAGTATGTAAAAAATATCGGTCAGAAAATTGTGATTCTAGCGGAATTTAACTCATCCGGAGAGCCAACCGGCTCAACGGGTTTTAATCAGATGACAGAGTTAAACCGGCGTTACAAAGAAAAGTACCCGGAATTTTATTGCGAAATTAACGGAGTGGATATTCTCCAGAACTTCATTAATAACGCAAACCCTAACTCGCCAGATGATATGTCAGATGTAGCCGCAGGTTTAACACCGCGCTCACTGCGCTACGATAATCTGCACCCGTCACAACAAATAAGTGGTAACGGCGGTTCTCTGACGCCAGAGTTTGCTCTCGATTATGGCGCAAACGTAAATGCTAATTTCGTTTATCAATTTCTCATGAATAAAGGGTGGTTATAA

Tertiary structure

PDB ID
6f3d7e6f1afe4e7df80f916a37dc9ae99c4329772acc5031c92641285c0b43d8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6598
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of phytopathogenic Pectobacterium atrosepticum bacteriophage Peat2 includes a CRISPR Cas4 nuclease Kalischuk,M., Hachey,J., Thomas,D. and Kawchuk,L. 2019-11-29 — GenBank