Phage RBP Database

Genbank accession

GENB_6c353840d214 [GenBank]

Protein name

receptor binding protein

RBP type

TF

Evidence GenBank

Probability 1,00

TF

Evidence Phold

Probability 1,00

TF

Evidence RBPdetect

Probability 0,88

TF

Evidence RBPdetect2

Probability 0,94

Seq2Symm

C3 confidence 0,935

C3	0,935
C1	0,044
D3	0,000

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MTKKPWRAGKDLSAVVENMEIGTGQRGDGRHAFVTREELVGLKLARRRASGGGSYALNPGVEIDSSLMVVDFPPKPLNFKATGGFGSVLLEWDMPNYRGHSLTEVWRGTEDDLADAVLVATTPGQVYGDPVDPGWSGFYWIRFVNAAGVKGPWHAVGGVAAQTQISVQALIDQIKEEAANSPVVEELRQEIKDAEGRAVQEAGVQTTEVVGNLREETLKTIGGVETRITDMDSSTSESLNEVNERITKLDEGGSKAFLSMWSKKAGADGVTAGIGIVAGKDSSGGAVSQVAISASQLFVFDPNDPDNTAYPFAVSGGKVVITKAMISDAVIETLVSQKIVADEVKAGVSITSPVIRSAVIQNGNFQVDSQGNLNIGGLFSVTSQGQLTIRYSNQNVGLVIRNDKIEVYDENGRLAVRIGRLS

Physico‐chemical properties

protein length:	422 AA
molecular weight:	44908,92560 Da
isoelectric point:	5,01209
aromaticity:	0,06161
hydropathy:	-0,16445

Domain architecture

GENB_6c353840d214

1 422 aa

RBD 258–360 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR053171
Unmapped

IPR053171 IPR015406

Coil
Unmapped

Coil

GENB_6c353840d214

1422 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1230
STR

DC_1230

GENB_6c353840d214

1422 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR053171	Unmapped	-	72	249	InterPro	Viral Tip Attachment Protein	-	-	-	-
Coil	Unmapped	-	184	204	Coils	Coil	-	-	-	-
IPR015406	RBD	DC_0135	258	360	InterPro cluster	Tip attachment protein J, central straight fiber domain	C-terminal	High	Text match	1265 proteins / 1266 hits

Proteins with similar domain architecture

Phage

Stx2a-converting phage Stx2_11106 [NCBI] · taxon 2816175

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host No host information

No CDS data available.

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)