Phage RBP Database

Genbank accession

QGH76370.1 [GenBank]

Protein name

minor tail protein

RBP type

TSP

Evidence DepoScope

Probability 1,00

Seq2Symm

C1 confidence 0,301 truncated

C1	0,301
C2	0,207
C3	0,076

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MQTTTLEVNKLLKEGLAVKALPQLIAEWNMNRYAGIQTVDSTPTEYDEGDPEYYPIESIADPLRPSSRGIVKARASVEGIVSEYTDRPGDKRYYLADYDDPYKYWSSPVASSLIGGLNGFSKTVRPYIIYKTASWTNKLYFLFENSAAWPVDYDIDITTDGTNWTTVGGDIIPDSKGRVVLYRQANGTWGTAVYRDNPVKLKGIRLKVNTLSSVGKYLELIEMSCRLEQDLTATLMTSSSQFNMGTTSFITPLGSASSNTASIQLSNIDGRYNNTNDESLFYGLVDKNIKFTYRIGYDTTPVGGSGMVYVTEYTMFADSWAGQGEEIATVSLKDASKFLQEIKPPKMFFENMTLGRIVWQLCDIIGFSDYFYDKTDDDKATIVPYFWTDGEKTIWEIFSSLASTTQSAIYFDEFGILQILTRDKAYNIGNPIAWQLDGVVNGTKQPDIVDVAQSYDFEANNVTVRYQATSISDVQGRTPVMDIAWQPEGDVVLRSSQLRESMDATQMFIRMTGSEASVWPYSGIIECEGELMRYDAKGYWYYNKSGVATFKAITSADEKKQIDEELSSPELAFKNYFSGWFRIAERGLWNTYPAAHKDDASGYGVKVANYKGDYKTWTGGFVHNKDQSTISLKATTSTNVNTCYVASRGSETDKSIWYVGTRLRFRDTGYNHGMAGIAFNLGSKDKGYYMEICRTDRLPGGRKYQNEINFYIRRSNGKLERFGPSSGKGVAMAISKNIWYDIDIAIRMENGVYGDPGAFVGHVIQVSINGNSVMTFTIPVSKKEPLTGRFGVFTRGSTHADFEYLYGNGTTEDLHIDTTDMFDRIRGGIVSSQADSEWIYKWHYTSHIVKKKKKYLWARYAQRFFDDFGPICHELREYDVQFDKFPAVHSNIYFSNDTQVVCPEYNANPFGAKFILANAYRNNAIVNGEDTLTFGADNPVEQKLMIYGRTVNKEDEKTIVSKNDDAIRRRGSVETEVSSDWIQTESAAQALADWITYHWADGCDEVEAEIFGNPLIQLGDIVSINYPQKDFDPVHHRYFVVELNRGYDTGYDTTKLTLRRVKA

Physico‐chemical properties

protein length:	1063 AA
molecular weight:	120085,96460 Da
isoelectric point:	5,23154
aromaticity:	0,12794
hydropathy:	-0,43556

Domain architecture

QGH76370.1

1 1063 aa

STR 137–217 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR008979
STR

IPR008979

QGH76370.1

11063 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0107
STR

DC_0107

QGH76370.1

11063 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR008979	STR	IPR008979	137	217	Merged direct domain	Galactose-binding-like domain superfamily	Central	Low	Positional only	24 proteins / 24 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

QGH76370.1

1 1063 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	29	29	0,9562
Central domain	30	403	375	0,5428
C-terminal	404	1063	659	0,2283

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Streptomyces phage Daubenski [NCBI] · taxon 2653725

Uroviricota Caudoviricetes Stanwilliamsviridae Samistivirus Samistivirus daubenski

Host

Streptomyces griseus [NCBI] · taxon 1911

Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces griseus

Genbank protein accession

QGH76370.1 [NCBI]

Genbank nucleotide accession

MN444876 [NCBI]

CDS location

range 40907 -> 44098
strand +

CDS

ATGCAGACAACGACACTTGAAGTGAACAAGCTATTGAAGGAGGGGCTAGCCGTAAAGGCTCTGCCCCAGCTTATTGCTGAATGGAATATGAATCGTTATGCTGGGATTCAGACAGTAGACAGCACCCCAACAGAATATGATGAGGGTGACCCAGAATACTACCCAATTGAATCAATTGCCGACCCACTGAGACCATCCTCACGAGGAATTGTAAAGGCGCGAGCCAGCGTTGAGGGAATTGTTTCTGAGTACACAGACAGGCCCGGCGATAAAAGGTATTACCTTGCAGACTATGATGACCCATATAAGTATTGGTCATCCCCAGTAGCAAGTTCTCTTATTGGTGGGCTCAATGGCTTCTCAAAGACTGTACGACCTTACATCATTTACAAGACAGCAAGCTGGACCAACAAGCTGTATTTCCTGTTTGAGAATTCAGCAGCATGGCCTGTGGATTACGATATCGACATCACTACTGACGGTACCAACTGGACTACTGTTGGTGGAGACATCATTCCTGATTCCAAGGGGCGTGTTGTTCTGTATCGCCAGGCAAATGGAACTTGGGGTACAGCAGTTTACCGAGACAATCCTGTAAAGCTAAAGGGTATTCGCCTCAAGGTAAATACGCTTTCATCTGTGGGCAAGTACCTTGAGCTAATCGAGATGTCTTGCCGACTTGAACAGGATTTGACAGCAACGTTGATGACTAGCAGTTCTCAGTTCAATATGGGAACAACTTCCTTCATCACGCCTTTGGGCTCAGCTTCATCAAATACTGCAAGCATTCAGCTTTCAAACATTGATGGACGATACAACAACACCAATGATGAATCCCTGTTTTACGGTCTTGTAGATAAAAACATCAAGTTCACTTATAGAATTGGTTATGACACGACGCCGGTAGGCGGAAGTGGCATGGTCTATGTAACTGAATACACAATGTTCGCAGATAGCTGGGCAGGCCAGGGAGAGGAAATTGCAACAGTTTCCTTGAAGGACGCATCAAAGTTCTTGCAGGAAATCAAGCCTCCAAAGATGTTCTTCGAGAACATGACTCTTGGACGTATTGTTTGGCAGCTCTGTGACATTATTGGATTCAGTGACTATTTCTATGACAAGACTGATGACGACAAGGCAACCATCGTTCCATACTTCTGGACAGATGGAGAAAAGACCATCTGGGAGATTTTCAGTAGTCTCGCCAGCACGACCCAGTCAGCCATCTACTTTGATGAATTTGGAATTCTACAGATTCTCACCAGAGACAAGGCGTACAACATTGGTAATCCAATTGCGTGGCAGCTAGATGGTGTAGTCAATGGAACTAAGCAGCCAGACATTGTTGACGTGGCTCAGAGCTATGACTTCGAAGCAAACAACGTAACTGTCAGATATCAGGCTACCAGTATTTCTGATGTCCAGGGTAGAACCCCTGTCATGGACATTGCTTGGCAGCCAGAAGGCGATGTTGTTCTTAGAAGCAGCCAGCTCAGAGAGTCAATGGATGCTACACAAATGTTCATCAGAATGACCGGCAGCGAAGCATCAGTCTGGCCTTATTCAGGAATCATTGAGTGTGAAGGTGAACTGATGCGTTATGACGCAAAGGGCTATTGGTACTACAACAAGTCTGGGGTGGCGACCTTTAAGGCCATCACATCAGCCGATGAAAAGAAGCAGATTGATGAGGAGCTAAGTTCACCAGAGCTAGCATTCAAGAACTACTTCTCTGGATGGTTCAGAATTGCTGAGCGAGGTCTATGGAACACATATCCAGCAGCACATAAGGATGACGCATCTGGATATGGAGTGAAGGTTGCTAATTACAAGGGGGATTACAAGACCTGGACTGGCGGATTCGTTCACAATAAGGACCAGTCAACCATCAGCTTGAAGGCCACCACATCCACTAACGTCAATACATGTTACGTGGCGTCTCGTGGTAGTGAAACTGATAAAAGCATTTGGTACGTGGGCACCAGGCTTCGTTTCAGGGACACTGGATACAACCACGGAATGGCTGGCATCGCCTTCAATCTCGGCAGCAAGGACAAGGGCTACTACATGGAGATTTGCCGAACAGACAGACTTCCAGGTGGGCGAAAGTATCAGAATGAAATCAACTTCTATATCCGTAGAAGCAATGGAAAGCTGGAGCGATTCGGCCCAAGCTCTGGTAAGGGTGTTGCCATGGCCATTTCAAAGAATATTTGGTACGACATTGACATCGCCATCAGAATGGAGAACGGTGTTTATGGAGACCCAGGTGCATTTGTTGGTCACGTTATTCAGGTAAGCATCAATGGTAATTCAGTCATGACCTTCACTATTCCAGTATCAAAGAAGGAGCCTTTGACAGGACGCTTTGGTGTCTTTACTCGTGGAAGCACTCACGCTGACTTTGAATATCTGTATGGAAATGGAACAACAGAAGACCTGCACATCGATACCACTGATATGTTCGATAGAATTCGCGGCGGCATTGTAAGTAGCCAGGCTGATTCAGAGTGGATTTACAAGTGGCACTACACAAGTCACATCGTAAAGAAAAAGAAGAAGTATCTGTGGGCCAGATATGCTCAGAGATTCTTTGATGACTTCGGTCCTATCTGTCATGAGCTTAGAGAGTATGACGTGCAGTTTGATAAGTTCCCTGCCGTTCACTCAAATATCTATTTCTCAAATGACACACAGGTCGTCTGTCCTGAATACAATGCCAATCCATTTGGTGCCAAGTTCATTCTTGCAAATGCTTACAGGAATAATGCTATTGTCAACGGTGAAGACACTTTGACGTTTGGTGCAGATAATCCTGTTGAGCAGAAGCTCATGATTTATGGTCGAACAGTAAACAAGGAAGATGAGAAGACAATTGTTTCCAAGAACGACGATGCTATTCGTCGTCGTGGAAGCGTAGAAACAGAAGTCTCCTCTGACTGGATTCAGACAGAGAGTGCTGCTCAAGCCCTCGCAGACTGGATTACTTATCACTGGGCAGATGGTTGTGATGAGGTGGAGGCTGAAATCTTTGGTAACCCATTGATTCAGCTTGGAGACATCGTGTCCATCAATTATCCACAGAAGGATTTTGACCCGGTACATCATAGGTACTTTGTCGTAGAACTCAATAGAGGATATGACACTGGATATGACACGACGAAGCTCACGTTGCGCAGAGTCAAGGCTTAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)