Phage RBP Database

Genbank accession

AGY48011.1 [GenBank]

Protein name

tail fiber protein

RBP type

TSP

Evidence DepoScope

Probability 1,00

TF

Evidence GenBank

Probability 1,00

TF

Evidence Phold

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,90

TSP

Evidence RBPdetect2

Probability 0,87

TF

Evidence UniProt/TrEMBL

Probability 1,00

Protein sequence

MAYVEKEMNLKRSFVEYKVTQPTTNFALPFEFVEAEQNLRVRLNGIDIEDLGYSFLVTNNITVQVTPAIPHGTLSISRETDIDKNLYKFTAGALFEARTMDKNFEQIRHSQQEVRDGFEKLSDATYTIIDTLQDVGQAAQDAADAAEQAAQAANDAAAQVNDKVSQVEIDYIHENGAALPHKDGIDYEENAVVVKGGVLQQWKGGAWVNVGEQEVKKYLLVAGVDESELDDDYNYLMQRLAQIAVDKGWDASFVVDGNINQHERNTGVKSLNQLRLTKPSKKGDRVFLASVNEAQNEGGGEFIATQKAGLVDDGGLVIASPDPMLFWVRVHYDTVTPEMFGAVGDNTADDAIPLQKTMSCGRAIEFDKGRKYRSSKPIEMFTGQKIKGNGAKITKYTASKTGITGRTDPSGNPYDYDQDCAVVFGAWYGWYSYIDIENLTIQKEAVLGADVGKVFFAPYISMSSLKSVVVKGGEYGFYGEDLWMLNWTRCEAYSKCGFYVGTGTSNQFNTCWSKETKEGYSAFRLHNLTYSSLINCCAEHVGEDGAPAEAAYHITNSDLTMIGCGIENIHAYNLIRIGYSWVTIENPSFIYGINNKYRHGTYTGLIDVSSSDSVVTLRGGHITATNSGTFADAVRVGGGTFNYETPLWNNVGFPDDSSGFKIRISNYAAIMNLTGFDGRKYTFNGRSKKWDIHTKAKFLNGLQANLLGTTHLNNIRKDFYIGTQNKGNNGSVANGYPFDGFGGTVLNFSDEDAAQYSNTAQLALSAVSNRVFFRRAAYEQALGSWFEFRTSANTTVDANGFVKNASPIVKLFADRIELNDDAEKQNIEFEKLGVGDYLIKGSSGFSDNGWYIETPKDANGNVLFSVIYATLENGDISVKTYQKKFDLETASIVADLEQPVDITVGRWIDLRLNEVSAN

Physico‐chemical properties

protein length:	918 AA
molecular weight:	101365,70390 Da
isoelectric point:	4,99475
aromaticity:	0,11111
hydropathy:	-0,35327

Domain architecture

AGY48011.1

1 918 aa

STR 329–604 · STR 703–775 · RBD 793–913 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

Coil
Unmapped

Coil IPR012334 cd19958 IPR058008

IPR011050
STR

IPR011050

AGY48011.1

1918 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0471
ATT

DC_0471 DC_0709

AGY48011.1

1918 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
Coil	Unmapped	-	143	163	Coils	Coil	-	-	-	-
IPR012334	STR	IPR012334	329	586	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
IPR011050	STR	IPR011050	333	604	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits
cd19958	STR	DC_0464	703	775	InterPro cluster	cd19958	Central	Low	Positional only	1183 proteins / 1674 hits
IPR058008	RBD	DC_0507	793	913	InterPro cluster	Phage tail protein, C-terminal domain	C-terminal	Low	Positional only	232 proteins / 232 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

AGY48011.1

1 918 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	350	350	0,9957
Central domain	351	687	338	0,9814
C-terminal	688	918	230	0,9825

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Acinetobacter phage Petty [NCBI] · taxon 1406779

Uroviricota Caudoviricetes Autographivirales Beijerinckvirinae Pettyvirus

Host

Acinetobacter baumannii [NCBI] · taxon 470

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Moraxellales

No CDS data available.

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)