Phage RBP Database

Genbank accession

YP_009833599.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence UniProt/TrEMBL

Probability 1,00

TF

Evidence GenBank

Probability 1,00

TF

Evidence Phold

Probability 1,00

TF

Evidence RBPdetect

Probability 0,88

TF

Evidence RBPdetect2

Probability 0,53

Seq2Symm

C3 confidence 0,885

C3	0,885
D3	0,039
C1	0,004

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MPKKTAPNQGLPYGWIRGEDYWGGPMSDSQIFLDTTLFLTLESLTFSAPPPDVVDGATYVVAANPTGAWAGHEGDVAVYVEKVWTFYKPRYGWRARVRSYEKFLWFNGTTWLDEATGDDPVNPDPDPSVKPKWYDIGVTVSDSMYANEPVVHLPILDPMYLPANMVGSQFDMADGASPAYYQFRVQRNGQNVATMTVEIGNFNASFTTAGGNPISFAAGDRMTVRAQQEAVAGMKNFGFVIRMGLV

Physico‐chemical properties

protein length:	246 AA
molecular weight:	27148,25980 Da
isoelectric point:	4,72863
aromaticity:	0,13415
hydropathy:	-0,23821

Domain architecture

YP_009833599.1

1 246 aa

STR 32–111 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR021251
STR

IPR021251

YP_009833599.1

1246 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0494
STR

DC_0494

YP_009833599.1

1246 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR021251	STR	DC_0873	32	111	InterPro cluster	Protein of unknown function DUF2793	Central	Low	Positional only	156 proteins / 156 hits

Proteins with similar domain architecture

Phage

Salmonella phage YSD1 [NCBI] · taxon 2749261

Uroviricota Caudoviricetes Casjensviridae Chivirus YSD1

Host No host information

Genbank protein accession

YP_009833599.1 [NCBI]

Genbank nucleotide accession

NC_048666.1 [NCBI]

CDS location

range 33110 -> 33850
strand +

CDS

ATGCCGAAAAAGACAGCCCCGAATCAGGGGCTACCCTACGGGTGGATTCGCGGGGAAGACTATTGGGGCGGCCCGATGTCCGACTCGCAGATCTTCCTCGACACCACGCTATTCCTGACACTGGAATCGCTGACCTTCTCCGCTCCGCCGCCGGACGTGGTGGACGGGGCCACCTACGTCGTCGCGGCTAACCCGACGGGGGCGTGGGCCGGGCATGAAGGCGATGTGGCCGTGTACGTGGAAAAGGTCTGGACGTTTTACAAGCCTCGCTACGGATGGCGCGCTCGCGTCCGTTCGTACGAGAAATTCTTGTGGTTTAACGGCACGACGTGGCTTGACGAGGCGACCGGGGATGACCCGGTCAACCCTGACCCCGACCCAAGCGTTAAACCGAAATGGTACGACATCGGCGTGACAGTGTCGGACAGCATGTACGCGAATGAACCCGTCGTGCATCTGCCGATCCTTGACCCGATGTACCTGCCAGCCAACATGGTAGGCTCTCAGTTCGACATGGCCGACGGTGCAAGCCCGGCCTATTACCAATTCCGCGTGCAGCGTAACGGCCAGAACGTCGCGACGATGACCGTGGAAATCGGAAACTTCAACGCATCGTTTACCACCGCCGGGGGCAACCCGATTTCCTTCGCCGCCGGGGATCGCATGACGGTTCGCGCGCAGCAGGAAGCGGTCGCCGGGATGAAAAACTTTGGCTTCGTAATTCGCATGGGACTGGTCTAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)