Phage RBP Database

Genbank accession

AKO59884.1 [GenBank]

Protein name

putative tail collar protein

RBP type

TF

Evidence RBPdetect

Probability 0,90

TF

Evidence RBPdetect2

Probability 0,98

Seq2Symm

C3 confidence 0,941

C3	0,941
C1	0,228
D3	0,005

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MPRDSNGNTNPLPGTIVQTGDTILPSQHNPALVDLYAMMTQSLSRDGQGGMRANLAMNGFQVTGLGNATQPGNAVPLSQFQSGTPVGAVIDYAGVNPPNTWQFCFGQAIEVSAYPDFVAACYVGNALNATAGFGYRTTSQTDPSNNRSTSGQFIVLPDLRGRVGAGKDDMGGSAANRVTTTGSGINGALIGSNGGEQNSTLTIYQIPNHDHGGSTGNGVGSYTILNVLKNLTGNLSLSAYGQVGFTNENIPFSTHNHPISPQGGGLPHNNMQPTVIINKIIKVSY

Physico‐chemical properties

protein length:	285 AA
molecular weight:	29584,46270 Da
isoelectric point:	6,26550
aromaticity:	0,06667
hydropathy:	-0,26526

Domain architecture

AKO59884.1

1 285 aa

ATT 81–164 · STR 165–283 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

SSF88874
STR

SSF88874

IPR037053
ATT

IPR037053

AKO59884.1

1285 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0363
ATT

DC_0363

AKO59884.1

1285 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
SSF88874	STR	SSF88874	81	283	Merged direct domain	SSF88874	Central	Low	Positional only	109 proteins / 109 hits
IPR037053	ATT	IPR037053	83	164	Merged direct domain	Phage tail collar domain superfamily	N-terminal	Low	Positional only	37 proteins / 37 hits

Proteins with similar domain architecture

Phage

Brucella phage 1066_141 [NCBI] · taxon 1667366

Uroviricota Caudoviricetes Perisivirus Perisivirus Tb

Host

Brucella abortus [NCBI] · taxon 235

Pseudomonadota Alphaproteobacteria Hyphomicrobiales Brucellaceae Brucella Brucella abortus

Genbank protein accession

AKO59884.1 [NCBI]

Genbank nucleotide accession

KJ133703 [NCBI]

CDS location

range 21749 -> 22606
strand +

CDS

ATGCCAAGAGACAGCAACGGCAACACCAATCCACTGCCAGGGACTATCGTTCAAACCGGCGATACTATTCTGCCATCTCAGCACAACCCAGCGTTAGTTGATCTTTATGCAATGATGACGCAAAGCCTTAGCCGGGATGGGCAAGGTGGTATGCGCGCTAATCTTGCAATGAATGGGTTTCAGGTTACGGGATTAGGCAACGCTACCCAGCCGGGAAATGCAGTTCCATTGTCTCAGTTTCAGTCTGGTACTCCTGTGGGCGCAGTCATTGATTATGCTGGCGTTAACCCGCCTAATACGTGGCAATTTTGCTTTGGGCAAGCGATCGAAGTTTCAGCATATCCCGATTTCGTAGCAGCTTGCTATGTTGGTAATGCACTCAATGCCACGGCAGGATTTGGATATCGAACCACTTCACAGACTGATCCATCTAATAATAGGTCCACGTCTGGACAGTTTATTGTTTTGCCTGATTTGAGGGGCAGGGTAGGTGCTGGTAAGGATGACATGGGGGGTAGCGCTGCAAACCGTGTTACTACCACTGGAAGTGGGATTAATGGGGCTTTGATAGGTTCTAATGGTGGTGAGCAAAATAGTACACTAACAATATATCAAATTCCCAATCATGACCACGGTGGCAGTACAGGAAATGGGGTTGGTAGCTATACAATACTAAATGTACTCAAGAACTTAACTGGTAATTTAAGTTTGAGTGCATATGGTCAAGTAGGTTTTACAAATGAAAATATACCATTTTCAACTCATAATCATCCTATAAGCCCACAAGGTGGAGGCTTGCCTCATAACAACATGCAGCCTACCGTAATAATCAACAAAATTATCAAGGTGTCTTACTAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)