Protein

Literature-linked
View in Explore
UniProt accession
H6WXG6 [UniProt]
Protein name
Uncharacterized protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,82
TSP
Evidence RBPdetect2
Probability 0,38
Seq2Symm
C3 confidence 0,973
C3 0,973
C1 0,156
I 0,003
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MGFGPAYGTGRGGGAVDIFTKKDGNPAIFANTGARDTYFTSNPDELAKVKSSGDAVAIGTANQITAAYVYKQNAWQPIATNFKGDKGAPGTPGDGIDYSHLTQGQIPKWDATAKRFTNSGVTSKEDGSITLEPASLHLGSHSISSSAENVTFTNVVTNKVYAPLWQEVGYGTKTGYIRSHGPRLEVELETDNSKDLVNPFFNYTAPADASLFGAKIEVAQDATNVEVHVLLNNEELWLARLGDLSAGEQDIFFTNPADFKAGNTYDVRVASSDGSDVILKGSQYDTPKATLHVAKWTDEIVASQEWLKTLKLVNDITLSGDQFSFTMLDGTSKTVTLPVGGSAKAAPYNFIELLTDRGISVSELTNSTPIFSFEEDTSITLTMPATSTLPVGRDSAFIVENRTTTPAAVVEVKASNTDIVNRPGLTSFNVPTNHTILFVSNVASNSWHAIVLASGGTGGSSLNEGQVVKALETTSSGKDLLVRYYDDTSSTLTFNPWVDDIAKLNKAVSDLERHLKNKTKFYVYKGDTIPTDVPRGSRGGYYFTFYGTTSELTLTTPVTASKISDGTILFIDNNSPDYSVTVNTPQGETIAGQASVSIAPEAAAWYVRNDNNWQELYSGFLPRSHKDLINEMKALVSADNNFIRNLNVQSDDPTQTAVAATSLEFKGFDVTTPADDTTKGIIKFKGATFENPDGSKVVTDVLKLVGMEVVDPGDGTPPKLMLTGGALPLPHPTSAYAFFDAAATVPDTVDFTSLTKFTNGKVTVTKSTADPQYVYILIPAAEGAGADRIGEQGGLPAFWDKSSKTYTVNGQSETFTVFRSPYPLKEQDVTLIIYH
Physico‐chemical
properties
protein length:835 AA
molecular weight: 89654,62340 Da
isoelectric point:4,89522
aromaticity:0,09341
hydropathy:-0,25677

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
H6WXG6
1 835 aa
Domain Start End Length (AA) Confidence
N-terminal 1 734 734 0,8811
Central domain 735 824 91 0,2756
C-terminal 825 835 10 0,9855
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Vibrio phage pVp-1 [NCBI] · taxon 1150989
Uroviricota Caudoviricetes Demerecviridae Vipunavirus Vipunavirus pVp1
Host
Vibrio parahaemolyticus [NCBI] · taxon 670
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Vibrionales

Coding sequence (CDS)

Genbank protein accession
AFB83932.1 [NCBI]
Genbank nucleotide accession
JQ340389 [NCBI]
CDS location
range 48714 -> 51221
strand +
CDS
ATGGGATTTGGCCCAGCCTATGGTACTGGTAGGGGCGGTGGTGCAGTTGACATTTTCACAAAGAAAGATGGAAACCCTGCCATATTCGCCAACACTGGTGCTAGAGACACATATTTTACATCAAACCCAGATGAATTAGCGAAAGTTAAATCTTCTGGTGATGCAGTTGCTATTGGTACAGCTAACCAAATTACAGCAGCTTACGTATATAAACAAAACGCGTGGCAACCTATTGCTACTAACTTCAAAGGAGATAAAGGTGCTCCAGGTACTCCTGGCGATGGTATTGATTACAGCCATCTTACTCAAGGACAAATTCCTAAATGGGACGCGACTGCTAAGAGATTTACTAATTCAGGTGTTACTTCGAAAGAAGATGGCTCGATTACCCTAGAGCCTGCATCATTACATCTAGGCTCACATTCTATTTCAAGTAGTGCAGAAAACGTAACATTCACTAACGTAGTTACAAATAAAGTGTACGCCCCTTTATGGCAAGAAGTAGGTTACGGTACTAAAACAGGGTACATTAGGTCACATGGACCAAGACTTGAGGTAGAGCTAGAAACAGATAACAGTAAAGATTTAGTTAACCCTTTCTTCAACTATACAGCACCTGCCGATGCTTCTTTATTTGGTGCTAAAATAGAAGTAGCTCAAGATGCTACCAACGTAGAAGTGCATGTACTCCTAAATAACGAAGAATTGTGGTTAGCTAGATTAGGGGATCTATCTGCTGGAGAACAGGATATTTTCTTCACAAACCCAGCAGACTTTAAAGCTGGTAATACCTATGATGTTAGGGTGGCTAGCTCTGATGGGTCTGATGTTATACTTAAAGGTAGTCAGTATGACACCCCAAAAGCTACGTTACATGTAGCTAAATGGACAGACGAGATAGTAGCTTCTCAAGAATGGTTAAAAACCCTAAAATTAGTAAATGACATTACATTAAGTGGTGATCAGTTCAGTTTTACAATGCTGGATGGTACTAGTAAGACTGTTACACTACCTGTTGGAGGTTCGGCTAAAGCGGCACCGTACAACTTTATAGAGTTGTTAACAGATAGGGGCATCTCAGTATCCGAACTGACTAACTCTACTCCTATTTTTAGTTTTGAAGAAGATACTTCTATTACTCTTACAATGCCTGCTACAAGTACTCTTCCGGTAGGTCGAGATAGTGCATTTATAGTAGAAAATAGGACTACTACACCCGCAGCAGTAGTAGAAGTAAAAGCAAGTAACACAGATATAGTTAATAGGCCTGGACTTACTTCTTTCAATGTGCCTACCAACCATACCATACTATTTGTAAGCAACGTAGCAAGCAACTCCTGGCATGCAATAGTGCTGGCCTCTGGTGGCACCGGTGGTTCTAGTTTGAACGAGGGGCAAGTAGTAAAAGCTCTAGAAACTACATCTAGTGGTAAAGACTTACTTGTACGCTACTACGACGATACCAGTTCTACCCTTACGTTCAACCCATGGGTAGACGATATTGCCAAACTAAATAAAGCTGTATCTGACTTAGAAAGACACCTAAAAAACAAAACTAAGTTTTATGTATATAAAGGTGATACTATACCTACCGATGTGCCTAGAGGCTCTCGCGGAGGGTACTACTTTACTTTCTATGGTACAACTTCTGAGCTAACTCTCACAACCCCTGTAACAGCTAGTAAGATTAGTGATGGTACTATATTATTCATAGATAATAATTCACCTGATTATTCTGTAACAGTAAACACACCGCAAGGAGAGACAATAGCAGGGCAGGCCTCTGTATCTATAGCTCCTGAAGCCGCCGCATGGTATGTTAGAAATGACAATAACTGGCAGGAATTATACTCTGGATTTTTACCGCGCTCCCACAAAGATCTTATTAACGAGATGAAGGCGTTAGTGAGTGCTGATAATAACTTTATTCGTAACTTAAATGTACAGAGTGACGATCCTACCCAAACTGCTGTAGCTGCTACTTCATTGGAATTCAAAGGGTTTGACGTTACCACTCCTGCTGATGATACTACAAAAGGTATTATTAAGTTCAAAGGGGCTACATTCGAGAACCCTGATGGTAGTAAAGTAGTTACAGATGTATTGAAACTTGTTGGTATGGAGGTTGTTGATCCAGGCGATGGTACACCACCAAAACTAATGTTAACTGGTGGAGCGTTACCTTTACCACACCCAACTAGCGCATATGCATTCTTTGATGCAGCTGCTACGGTACCAGATACAGTAGACTTCACTTCATTAACTAAGTTTACTAACGGTAAGGTTACAGTTACTAAATCTACTGCTGACCCTCAATATGTGTATATTCTTATTCCTGCTGCTGAAGGGGCAGGGGCTGACCGTATTGGAGAGCAAGGTGGACTACCTGCATTCTGGGATAAAAGCTCTAAAACTTATACCGTCAATGGACAGAGTGAAACATTCACAGTGTTCCGTTCTCCTTACCCACTAAAAGAGCAGGACGTTACACTAATAATTTACCATTAA

Genome Context

Tertiary structure

H6WXG6
ESMFold structure
Source ESMFold
pLDDT 65.8
Oligomeric state monomer
Download structure

Experimental validation

Literature-linked

A publication is attached to this entry, with nothing stating that an experiment backs the annotation. Treat as a lead, not as validation.

Tier Source Assay Claim Reference
Literature-linked PubMed
22628398
 literature_xref — PMID 22628398

Rows marked “Validated by sequence identity” come from a different entry carrying the same sequence — the experiment was not performed on this protein.

Literature

Title Authors Date PMID Source
— — 22628398 PubMed