Phage RBP Database

Genbank accession

AFU63102.1 [GenBank]

Protein name

minor structural protein

RBP type

TSP

Evidence DepoScope

Probability 1,00

Protein sequence

MSLGNQYLILDSHFNNVGLLTVDGATRFTNDSITMQLADSDQQNTQYDDDVSVGSEDSYEGKTNLNAQSKKYDHSGTVTVPQGQPDSDKVVSGNYLAYHDDYLNRWYIMYIYSTSEESTSTTSVNTVAYVCNLVLRDLAFTIPLQSTVKQQNVEQVFSKVFQNSGWQVEYNTGSATLADTDSFDGKTKGTVLLQNALQLFDVEIDAYVKINTQGKVVDKIVEVTDELSSDIVYQEAIFGENITNIKRVTVAAPITKLYAYGANGSTMAPHNNGMTYIVDDDANQLYNYEGSLHGKYLEGVITANQISDNTGLQSWAKQMLKLFNHPRTYYDVNVAPGFLPPLGATIRFKDEHITPALDATGRVIQRTISFSSPYSSSIAFGEFVTVPVATPQWLTDYQSALADAVAKAINDATAITPVLSHPDGLDFAQGESSKRLLLSAWVGKQNISTYIDSKGFAWRHVNTDGSIDPNWEQTGDIINVTPSLMGNIRAYIDGDYISEDPELSINQNNYVKIGEFDPYDSDVHRIVQHIEQLDDGTWYVSAATSGDDCNYMHRDKDFKLIDKMVLKGGGHGTSFGVLYQEGQPWIICNQRNSAGNWDIVRFKYQGGKTLDINDTDHLITPGGYPRVSFDRKNNMMGYSSGGYKFFILNVSDLLAGVKTVMYTIDMLDYDFVGDDDIFQGQALDFPYVYWSVGNQFLGKTCSFYCVNILHRGEVMHPYYDALIGLGLTGKIIEPESLSFATINGKRTLVHSFNVTPPDGNPPKKQMQYATDIIYRPAMPVVSGGSDGSDDTGNE

Physico‐chemical properties

protein length:	794 AA
molecular weight:	88015,81090 Da
isoelectric point:	4,65246
aromaticity:	0,10831
hydropathy:	-0,34068

Domain architecture

AFU63102.1

1 794 aa

ENZ 145–382 · RBD 558–694 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR007119
Unmapped

IPR007119 IPR048799

IPR010572
ENZ

IPR010572

AFU63102.1

1794 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0266
STR

DC_0266

AFU63102.1

1794 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR007119	Unmapped	-	64	381	InterPro	Phage tail spike protein, N-terminal domain	-	-	-	-
IPR010572	ENZ	DC_0675	145	382	InterPro cluster	Tail spike domain	Central	High	Text match	419 proteins / 419 hits
IPR048799	RBD	DC_0739	558	694	InterPro cluster	P68 RBP/TagC-like, beta-propeller	C-terminal	High	Text match	25 proteins / 25 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

AFU63102.1

1 794 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	551	551	0,9950
Central domain	552	783	233	0,0800
C-terminal	784	794	10	0,0707

Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Lactobacillus phage ATCC 8014-B2 [NCBI] · taxon 1225795

Uroviricota Caudoviricetes Tybeckvirinae Douglaswolinvirus B2

Host No host information

Genbank protein accession

AFU63102.1 [NCBI]

Genbank nucleotide accession

JX486088 [NCBI]

CDS location

range 24669 -> 27053
strand +

CDS

ATGTCATTAGGTAATCAATACCTCATTTTGGATTCACATTTTAACAATGTTGGCCTATTGACTGTTGATGGAGCTACAAGATTTACTAACGACTCCATTACTATGCAGTTGGCAGACTCAGACCAGCAAAATACACAATACGACGATGACGTTAGTGTCGGTAGCGAAGATAGCTACGAAGGTAAAACTAACCTTAACGCACAATCAAAAAAATACGACCATAGCGGTACTGTAACGGTGCCACAAGGACAACCAGATAGCGATAAGGTAGTGTCTGGTAACTATTTAGCATATCACGATGACTACCTTAACCGTTGGTATATCATGTACATTTACTCAACTTCCGAAGAATCTACTTCAACAACTTCTGTAAATACCGTTGCATATGTATGTAATTTAGTTCTAAGGGACTTAGCATTTACGATTCCATTGCAATCAACAGTAAAACAGCAGAATGTCGAACAAGTTTTTAGCAAGGTTTTCCAAAACTCTGGCTGGCAAGTAGAATACAACACAGGAAGCGCAACCTTAGCAGATACGGATTCTTTTGATGGTAAAACAAAAGGAACTGTATTATTGCAGAACGCATTACAACTATTTGATGTTGAAATTGACGCTTATGTTAAAATCAATACACAAGGTAAGGTTGTAGACAAGATAGTAGAAGTGACAGATGAGTTATCTTCTGATATCGTTTACCAAGAAGCTATTTTTGGTGAGAATATCACGAACATTAAACGTGTCACAGTTGCGGCGCCTATTACAAAGTTGTACGCGTATGGTGCAAACGGCTCAACGATGGCTCCTCATAACAATGGTATGACTTATATTGTTGATGATGATGCCAATCAGCTTTATAACTATGAAGGTTCATTACACGGTAAATACCTAGAAGGTGTTATCACCGCAAACCAGATTAGTGATAACACTGGTTTACAATCTTGGGCAAAACAGATGTTGAAGCTATTCAATCACCCTAGAACTTACTATGATGTTAACGTTGCTCCCGGATTCTTACCACCACTAGGTGCTACGATTCGTTTTAAAGATGAACACATTACGCCAGCATTAGACGCCACTGGACGTGTTATTCAAAGAACAATTAGTTTCTCATCACCATATTCAAGCTCTATTGCCTTTGGTGAGTTCGTAACCGTTCCTGTAGCAACACCACAATGGTTAACAGATTATCAATCAGCATTAGCTGACGCCGTAGCCAAAGCCATTAATGACGCTACTGCTATTACTCCAGTACTATCACACCCAGATGGTCTTGACTTTGCACAAGGTGAATCGTCAAAACGTCTATTGTTAAGCGCATGGGTTGGTAAGCAAAATATCAGCACATATATTGATAGCAAGGGGTTTGCATGGCGGCACGTTAATACTGACGGCTCAATTGACCCTAATTGGGAACAAACTGGTGACATCATTAACGTAACCCCATCTTTAATGGGCAACATTAGAGCTTATATTGATGGTGATTATATATCAGAAGACCCTGAGTTGTCAATCAATCAGAACAATTACGTTAAAATTGGTGAATTTGACCCATACGATAGCGATGTTCATCGTATTGTACAACACATTGAACAATTAGACGACGGAACTTGGTACGTATCAGCCGCCACTTCTGGTGATGATTGTAATTACATGCACCGCGATAAAGATTTTAAACTGATTGATAAAATGGTTCTAAAAGGTGGAGGGCACGGCACTTCATTCGGTGTTCTATATCAAGAAGGGCAACCATGGATTATTTGTAATCAAAGAAATAGTGCTGGTAACTGGGATATTGTCAGGTTCAAATATCAAGGTGGCAAAACACTAGATATTAACGATACTGACCACTTAATTACTCCCGGTGGTTATCCTCGTGTTAGTTTTGACAGGAAAAACAATATGATGGGGTACAGTAGCGGTGGTTACAAATTCTTTATATTAAATGTATCAGACCTATTGGCTGGAGTCAAGACGGTTATGTATACGATTGATATGCTTGATTATGACTTTGTTGGTGATGATGATATTTTCCAAGGGCAGGCATTAGACTTCCCATACGTTTACTGGAGTGTTGGTAATCAATTTTTAGGTAAAACGTGTTCTTTCTATTGTGTAAACATTTTACACCGCGGTGAAGTTATGCACCCGTATTACGACGCCTTAATCGGTTTGGGGTTGACTGGAAAAATAATTGAACCAGAAAGTCTATCATTCGCAACAATTAACGGCAAACGAACCTTGGTTCACTCATTCAACGTTACTCCGCCAGACGGGAACCCGCCTAAGAAACAAATGCAATATGCTACTGATATTATTTATCGGCCAGCAATGCCAGTTGTCAGCGGTGGTAGTGATGGTAGTGACGATACAGGTAACGAGTAG

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)