Protein

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Genbank accession
QDP42928.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,53
Protein sequence
MKISAVKEYEGSLKKLSNLLADSNKKVQGVFYTNTFFSRRYLSRANSVVEDIDLAENFVKLTVATRLEPVGLLEVENTLDMLVEYEAGDIPGFVQAGLLDGSDIEPQPLTPEIVATTKGLYTVDILLNMKDPKVTYQEFKIAGVPFTLVNLHQGFDEDYDQTVTLLFGPAEKLYFFSNFYEKTLNNRDTKIMLDLIMDENITGKVIKAVKSETESVHTMLHPYEELISSYMTIDGSYVFGHGSGYIRISREEIGKYKMTLEPQGTSGRYMLRLSNGKGVIRLYME
Physico‐chemical
properties
protein length:285 AA
molecular weight: 32215,50260 Da
isoelectric point:5,06324
aromaticity:0,10175
hydropathy:-0,19088

Domains

Domains [InterPro]
Coil
Unmapped
6–26
Coil
QDP42928.1
1 285
Architecture
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QDP42928.1
1 285
Domain Start End Length (AA) Confidence
N-terminal 1 129 129 0,2819
Central domain 130 274 146 0,5537
C-terminal 275 285 10 0,9601
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-129
Central
130-274
C-terminal
275-285

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage vB_BmeM-Goe8
[NCBI] 		2593638 Uroviricota > Caudoviricetes > Herelleviridae > Goettingenvirus > Goettingenvirus goe8
Host Bacillus megaterium DSM 319
[NCBI] 		592022 Bacillota > Bacilli > Caryophanales > Bacillaceae > Priestia > Priestia megaterium

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDP42928.1 [NCBI]
Genbank nucleotide accession
MN043729 [NCBI]
CDS location
range 112538 -> 113395
strand +
CDS
ATGAAAATTTCAGCAGTGAAAGAGTACGAAGGCAGCTTAAAGAAGTTAAGCAATTTATTGGCAGACAGTAACAAGAAAGTGCAAGGAGTGTTTTATACAAACACATTCTTCTCAAGACGTTATTTATCTCGAGCAAACAGTGTTGTAGAGGATATCGACCTAGCAGAGAACTTCGTTAAGCTTACTGTAGCTACTCGTTTAGAGCCTGTAGGATTGTTAGAAGTAGAAAACACGTTAGATATGTTAGTAGAGTATGAGGCAGGAGACATCCCGGGATTCGTTCAAGCAGGTTTATTAGACGGGTCCGATATTGAGCCACAACCTTTAACACCTGAAATTGTAGCAACAACAAAAGGTCTATACACTGTAGATATTTTACTTAACATGAAAGACCCAAAGGTTACATATCAAGAGTTTAAAATTGCTGGCGTACCTTTTACACTAGTAAACTTACATCAAGGGTTCGATGAGGACTACGATCAGACTGTAACATTATTATTCGGTCCTGCTGAGAAGCTTTATTTCTTCTCTAACTTCTATGAAAAAACACTAAACAACCGTGATACGAAGATTATGCTTGACTTGATCATGGATGAGAATATCACAGGTAAGGTAATTAAAGCGGTTAAGTCAGAGACTGAATCAGTTCACACAATGTTACACCCTTATGAAGAACTTATCAGTTCATATATGACAATCGATGGCTCTTATGTATTCGGACATGGTTCAGGTTATATTCGTATCAGCCGAGAAGAAATTGGCAAGTACAAGATGACTCTAGAGCCTCAAGGAACTAGCGGCAGATACATGTTACGATTAAGCAACGGCAAAGGTGTTATTCGTCTTTATATGGAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
f3ff4ba2b26111ab44ddf27f8b11142b3352579970553d2643077bdc5a7bd5be
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3587
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50