Phage RBP Database

Genbank accession

AHK11691.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence GenBank

Probability 1,00

TF

Evidence Phold

Probability 1,00

Seq2Symm

I confidence 0,946

I	0,946
H	0,819
C2	0,003

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MADTSHNGAIYTISASKTLANVPVPISAFPKDTDPFDVPNTDISDMEIGTNGDEITWSIQNPVESTLAVIPATDDHEILQTIYNANRSEKGSPGAKDVITLVRILPNGETTTMKGRITSGPATTSLASSGKIKTPTYGFKWFKVFRTPAINIEVGF

Physico‐chemical properties

protein length:	156 AA
molecular weight:	16728,62200 Da
isoelectric point:	5,07501
aromaticity:	0,07051
hydropathy:	-0,22115

Domain architecture

AHK11691.1

1 156 aa

STR 3–144 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR054440
STR

IPR054440

AHK11691.1

1156 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR054440	STR	DC_0220	3	144	InterPro cluster	Tail fiber protein gp32-like	Central	Low	Positional only	82 proteins / 82 hits

Proteins with similar domain architecture

Phage

Shewanella sp. phage 1/41 [NCBI] · taxon 1458861

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host

Shewanella sp. [NCBI] · taxon 50422

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Alteromonadales

Host

Shewanella sp. 41 [NCBI] · taxon 1386774

Bacteria Proteobacteria Gammaproteobacteria Alteromonadales Shewanellaceae Shewanella

Genbank protein accession

AHK11691.1 [NCBI]

Genbank nucleotide accession

KJ018212.1 [NCBI]

CDS location

range 27498 -> 27968
strand +

CDS

ATGGCTGATACTTCACACAATGGCGCGATTTACACTATTAGCGCATCCAAAACGCTGGCAAATGTGCCCGTGCCAATTTCGGCATTCCCGAAAGACACAGATCCGTTTGACGTGCCAAACACTGACATTTCAGATATGGAAATCGGCACCAACGGCGATGAGATCACTTGGTCAATTCAAAATCCTGTTGAATCGACATTAGCGGTTATTCCCGCAACTGACGATCACGAGATTTTGCAGACTATCTACAATGCCAATAGATCCGAAAAAGGCTCACCTGGCGCTAAAGATGTGATCACCCTTGTGCGAATTTTGCCAAACGGCGAAACAACCACGATGAAAGGGCGCATTACTTCTGGACCAGCTACCACTTCGTTGGCAAGTTCTGGTAAAATCAAAACTCCTACATATGGGTTTAAGTGGTTTAAGGTGTTCCGCACACCAGCGATCAATATTGAAGTTGGATTTTAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)