Protein

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Genbank accession
CAL9983752.1 [GenBank]
Protein name
tail fiber protein proximal subunit
RBP type
TF
Evidence RBPdetect
Probability 0,52
Protein sequence
MSEFRKAFRASGLDASGSNVVNVAHPRIGEILDGLNLGYFIDENTVQEYDPTRERYNEDFIVEFNQRLYKNIIPITTAEPFNALKWKKMRNDPEWEEVDSSIGANVGDFLFLTASSSITITLPETPLTGDTVTIKDGKGVLSAYPTTVAAAGGLTIQSYGIGGALTSDETMLMNRPSSTVYFVYNGIAWTYQIDHDPYYTYIDAAHPTQQSGHLANGGYVATCEETIAIQAADKTIAISLPLHAVPGDVVRLRDVSTNITQTRIQIGIHPTLDDQQIIHPISGVGAETITLDNIGHAELMYVGGDNNTWVIVISHEAQPWQHLGASSTEQLIVNRRYDININSAVAAMTITLPQSPVDGDWIELSNVKTPGKEVTVQVHPQFGDDDVGHGANEYKIVRSLDEYRMVKYSEFAATVDTFNDSFTINDEDRGYSFILFYDATRKVWDFADISSRIDIVDENHRKRPGLAKLASPTEALAHGIDYAHAEDTGSSWANQNPLKDHVITVETLDARRAAEDQVGIARVALLTTDEALEMSRVITNGNETSRYADSAFRHDIFITPRSFNARTALENRRGVVEIATQNETRSTTNDTQVITPRKFHAAQAEEDLTGVGKLVKASDNINADGTVESTANMRSDRTLNGTDNTVYDKTDHLRFVTAKMLDEYRATENQPGTLWVAKSTELRINDSQVDDAIITPKKFAAWTASSTIRGISRVATLAEARATSGSGEAWDRVFITPSTLNDRTATESRRGVAEIATQTEVDTGTDSTRMIVPLKLKTWLDRDHFVTAGTDGLSHTGTIWDDVTFSIASATETQRGTLQVATQAEADSQSSPLDTVMLTPKKLNSRRATESLAGIVRLATSTEVASGSASNEIVLTPSDLTYWTRTAANSRSSESRYGTTRSATASETFVGDSTNGSSQAYTAYNRHQYAVSPYGLHYALQNYLPLNAKADDSELLDGLNSTQYARSDVDDFIAGTYTFTDNEIKIQGANPRIEFKDTTDNNSTREIYYQSGDIGFTDVENNWQLKVARNGYTNVYGGLEVDGAGSFGSSIYENESSANGRSPGTGTLRTKYLGIDNMAATAAKWETARTVTFSGDLTGSVSFDGSSNVTASVQVNNNSHAHSGENITSGTVSNDRLNKASRTNKGIVQVTSDVRTADPSSTSAEHTALSAGAGKTLSERIDLFTPDGGTGESVKYRDYIQVGSVRMSTTNQGVMEFTFGHAI
Physico‐chemical
properties
protein length:1223 AA
molecular weight: 133333,06750 Da
isoelectric point:4,91813
aromaticity:0,07686
hydropathy:-0,42878

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage D525
[NCBI] 		3105285 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAL9983752.1 [NCBI]
Genbank nucleotide accession
OZ195947 [NCBI]
CDS location
range 25362 -> 29033
strand -
CDS
ATGTCAGAATTCCGCAAAGCATTTCGTGCGTCAGGTCTTGATGCGAGTGGTAGCAACGTTGTAAACGTAGCACACCCGCGTATCGGTGAAATCTTAGATGGTCTTAACTTAGGTTATTTCATCGACGAAAACACAGTTCAAGAATATGACCCAACACGTGAACGCTATAACGAAGATTTCATCGTTGAGTTTAATCAACGTCTATACAAAAACATTATCCCGATCACTACCGCAGAACCGTTTAATGCACTTAAATGGAAAAAAATGCGTAATGACCCAGAGTGGGAAGAAGTAGATTCGTCTATCGGTGCTAACGTAGGTGACTTCTTGTTCTTGACGGCAAGTTCGTCGATTACAATCACACTACCTGAAACGCCTCTAACAGGCGATACAGTAACAATCAAAGACGGCAAAGGCGTACTTTCAGCGTACCCAACTACAGTAGCCGCGGCTGGCGGATTGACAATTCAATCATACGGCATCGGTGGCGCGCTAACATCTGACGAAACAATGTTGATGAATCGCCCGTCTAGCACAGTTTATTTCGTGTATAACGGTATCGCATGGACGTATCAAATCGACCACGACCCGTACTACACTTACATTGACGCAGCTCACCCGACACAGCAATCAGGTCACCTTGCAAATGGTGGTTATGTTGCTACGTGTGAAGAAACAATCGCGATTCAAGCGGCTGATAAAACAATCGCTATCTCATTGCCACTGCACGCAGTACCGGGCGATGTAGTGCGTCTGCGCGACGTTTCAACGAACATCACACAAACTCGAATTCAAATCGGCATTCACCCGACGCTTGATGATCAGCAAATCATTCACCCAATTAGCGGTGTAGGAGCTGAAACAATCACGCTAGACAATATCGGTCATGCTGAACTGATGTACGTTGGCGGTGATAACAACACATGGGTAATCGTGATCTCCCACGAAGCTCAACCGTGGCAGCATCTAGGCGCATCAAGCACTGAGCAATTGATCGTGAATCGTCGTTACGACATCAACATTAATAGTGCAGTTGCAGCGATGACAATAACGCTTCCGCAATCGCCAGTTGATGGTGACTGGATTGAGTTGTCAAACGTTAAAACACCGGGTAAAGAAGTAACTGTTCAAGTTCACCCTCAGTTCGGTGATGATGATGTCGGTCATGGTGCAAACGAATACAAAATCGTTCGTTCGCTTGACGAATACAGAATGGTTAAGTACAGTGAATTCGCAGCGACTGTAGATACGTTCAACGATAGCTTTACTATCAATGACGAAGATCGCGGTTACTCATTCATATTGTTCTACGATGCAACTCGCAAAGTGTGGGATTTTGCTGATATCTCGTCTCGTATCGATATCGTTGATGAGAATCACCGTAAGCGTCCGGGTCTTGCTAAACTAGCATCACCGACTGAAGCACTTGCACATGGCATCGACTACGCGCACGCTGAAGATACTGGTAGTTCATGGGCGAATCAAAACCCACTGAAAGATCACGTGATCACAGTTGAAACGCTAGACGCACGTCGTGCAGCAGAAGATCAAGTCGGTATCGCTCGTGTAGCTCTATTGACAACTGATGAAGCACTTGAAATGTCGCGTGTTATCACGAACGGCAACGAAACAAGTCGTTATGCTGATTCAGCGTTCCGTCATGATATTTTCATTACGCCTCGCTCATTCAATGCGCGTACAGCTCTTGAAAATCGTCGCGGTGTTGTTGAGATTGCTACGCAGAATGAAACTCGCAGCACTACAAACGACACGCAAGTAATCACGCCACGTAAATTTCACGCTGCTCAAGCTGAAGAAGATCTAACGGGTGTTGGTAAACTTGTAAAAGCGTCTGATAACATCAATGCTGATGGTACAGTCGAATCGACTGCAAACATGCGTTCAGACCGTACACTAAATGGCACTGACAACACAGTTTACGATAAAACTGATCATCTTCGTTTCGTAACAGCGAAAATGCTTGATGAGTATCGTGCGACTGAAAATCAACCGGGTACACTATGGGTTGCTAAGAGCACTGAGCTTCGTATTAACGATTCTCAAGTTGATGACGCTATCATCACGCCTAAGAAATTCGCAGCGTGGACAGCAAGTTCAACAATTCGTGGTATTTCTCGCGTTGCTACACTAGCTGAAGCTAGAGCGACATCGGGTTCAGGCGAAGCATGGGATCGCGTATTCATTACGCCAAGCACACTAAACGACCGTACTGCTACAGAATCGCGTCGCGGTGTTGCTGAAATCGCAACTCAGACTGAAGTTGATACTGGTACTGATAGTACACGAATGATCGTCCCTCTTAAACTGAAGACATGGCTTGACCGTGATCACTTCGTTACAGCAGGAACAGACGGCTTATCGCATACGGGTACAATTTGGGACGATGTAACGTTCTCAATCGCATCTGCGACTGAAACACAACGCGGTACGCTGCAAGTTGCAACGCAAGCTGAAGCTGATAGCCAGTCGAGCCCACTTGATACTGTAATGCTAACACCGAAGAAACTGAACTCGCGTCGTGCGACTGAATCTTTGGCTGGTATCGTTCGCCTTGCAACTTCAACTGAAGTGGCTAGCGGTTCAGCGTCAAATGAAATCGTGTTAACACCAAGTGACTTGACTTACTGGACACGCACTGCGGCAAACTCACGCTCAAGTGAATCACGCTACGGTACAACTCGAAGCGCGACTGCAAGTGAAACGTTCGTCGGTGATAGCACTAACGGTTCATCACAAGCGTACACAGCATATAATCGTCATCAATATGCAGTAAGCCCATACGGCTTGCACTACGCATTGCAAAACTACTTGCCATTGAACGCAAAAGCTGATGATTCAGAATTGCTAGACGGCTTGAACAGCACGCAGTATGCACGTTCTGATGTTGACGATTTCATTGCAGGGACATACACGTTCACCGACAATGAAATCAAGATTCAGGGTGCTAACCCGCGTATCGAGTTCAAAGATACAACGGACAACAACAGCACACGTGAGATTTACTATCAGTCGGGTGATATCGGTTTTACTGATGTTGAAAACAACTGGCAGCTTAAAGTAGCACGAAACGGCTACACTAACGTGTACGGTGGTCTTGAAGTTGACGGGGCGGGTTCTTTCGGCTCATCAATTTATGAGAATGAAAGTTCTGCAAATGGTCGTTCACCGGGTACTGGTACACTACGTACGAAATACTTGGGTATTGACAACATGGCTGCGACGGCTGCGAAGTGGGAAACTGCTCGTACTGTTACATTCAGCGGTGATTTGACGGGTTCAGTTAGCTTCGACGGTAGCAGCAATGTTACTGCAAGCGTACAAGTGAACAACAACAGTCACGCACACTCAGGTGAGAACATCACATCTGGCACTGTGAGCAACGACCGCTTGAATAAAGCAAGTCGCACAAACAAAGGTATCGTTCAAGTAACAAGCGACGTTCGTACTGCGGACCCAAGCTCAACTTCAGCGGAACATACTGCGTTGTCAGCGGGTGCAGGTAAAACTCTATCTGAACGCATCGACTTGTTCACGCCTGATGGCGGTACTGGTGAGAGTGTTAAATACAGAGACTACATTCAAGTTGGCTCTGTAAGAATGTCAACGACTAATCAAGGCGTGATGGAATTTACTTTCGGTCACGCAATTTAA

Tertiary structure

PDB ID
05784b2ceabd9f9f319bf19c9fa7a87a69f677ef5b956d9ff4a7a4b5ef6011c9
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2397
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50