Protein
View in Explore- Genbank accession
- XNS43298.1 [GenBank]
- Protein name
- tail spike protein
- RBP type
-
TSPTSPTSPTF
- Protein sequence
-
MARNIEEIFGGVVVAPHQIPFTYTSTNGGETFISLPFYPITGFVTINGGVQVPLDNFVIDGNTLNLGRELEPSDVVFCLFDKIMSPQDASNNAIRIYKFISVGGETGFTPDFTTYGVQSLYVNGKYQIAGEDYTYSKTDGKVSFTSPLIAGVWVAAEMNIKQNIPALAGNGGASEIGTASGQNVQVELDSFRNLFGEYGFSMVGQTTYQGLRNYHGNSNYMMVYGRAYLLDGGHGIFDQVPGGAAMTIPDDDCVHIRDTLGRLWRRRFEDNVIRMSWAGAKNQLETSSPQDDAFRNCLLAAKSLSPTGYPQSIIKGLDRGVVYLAERHYIRCGNFPEYMAWKLPPTGGGDRFGLDLLCALGEGAGFFIVQANNPLLRVRVDNTGIPFNVSNYTDAQLVSIVENNYILRLESMVNAPEFDVHPGNYPGTVLYSTGKKDYSAVTAQWPDLVQVLPSIQNVGSAVFNIKNCGRDFMLTNTGAGLGHFHSVWSQNNRLPGYISNCYDLTMTYEDYVPHNETSGGLIFSECGTLSLENILIGAGGIGHLCIWDCRNVHMNRHISICGNTTWAASNQVDDLYALEICNSEVHMSGVHAQNSGKFARVGFNSQLTVDHLTAWDVSKLFLMTNDLTKLKYRGQRKDVTGDPSRIFVTSGFAQNLNASQFGWACTPVIEIDSTVNGDFKLYWNCWTNNVHAGYGSESEANLAIVSVASTSSTGTVSFGEDAKLEGNTTNYVLRLANKNQLGKVRTRQTSFCRVRYTNDNSQSSFAMREAAHDNGTTVIPIDGTTYSYPYRRPAKYFVSLNVPAGGGSCSVTLNGMTIFQTTVVGTHGIVIEMKYQETVVFTSSNVTVSNAQWRYILEE
- Physico‐chemical
properties -
protein length: 859 AA molecular weight: 94278,74070 Da isoelectric point: 5,55660 aromaticity: 0,10827 hydropathy: -0,17369
Domains
Domains [InterPro]
No domain annotations available.
Legend:
Pfam
SMART
CDD
TIGRFAM
HAMAP
SUPFAM
PRINTS
Gene3D
PANTHER
Other
Taxonomy
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
XNS43298.1
[NCBI]
Genbank nucleotide accession
PP738768.1
[NCBI]
CDS location
range 35018 -> 37597
strand +
strand +
CDS
ATGGCCAGAAACATAGAAGAAATCTTCGGTGGGGTAGTCGTTGCACCACACCAAATCCCGTTCACATACACTTCAACCAACGGCGGGGAAACTTTCATTTCTCTGCCGTTTTATCCTATCACAGGGTTCGTTACTATCAATGGTGGCGTGCAGGTCCCGCTTGATAATTTTGTAATTGACGGGAATACATTGAACCTTGGTCGTGAATTAGAACCAAGTGATGTTGTATTCTGTTTGTTCGATAAAATAATGTCTCCACAGGATGCGAGCAACAATGCAATCCGAATTTATAAATTCATCTCAGTAGGTGGAGAAACTGGATTTACTCCAGATTTTACCACTTATGGCGTCCAATCCCTTTATGTCAACGGGAAATACCAAATTGCGGGCGAAGATTACACATATTCCAAAACGGATGGGAAAGTGTCTTTCACTTCCCCATTAATTGCTGGGGTATGGGTCGCTGCTGAGATGAATATCAAGCAAAACATCCCTGCTTTAGCTGGTAATGGGGGTGCATCAGAAATTGGAACAGCATCTGGGCAAAATGTACAAGTAGAACTTGATTCATTCCGTAATTTGTTCGGAGAATACGGGTTTAGTATGGTAGGGCAGACCACATACCAAGGCCTCAGGAATTACCATGGTAATTCCAATTATATGATGGTATATGGTAGGGCATACCTTTTGGACGGAGGGCACGGAATATTCGACCAGGTTCCCGGCGGGGCGGCGATGACTATCCCTGATGATGATTGTGTACACATCCGAGATACGTTGGGACGGTTGTGGCGCCGCAGATTCGAAGACAATGTTATAAGAATGAGTTGGGCGGGCGCAAAAAACCAATTAGAAACTTCTTCACCGCAAGATGATGCTTTCAGAAATTGCCTCCTTGCGGCGAAATCGCTGTCTCCTACCGGTTATCCACAATCAATTATCAAAGGTTTAGATCGTGGTGTGGTTTATCTTGCAGAGCGGCATTATATTCGTTGTGGTAATTTTCCTGAATATATGGCATGGAAGTTGCCCCCTACTGGCGGTGGTGACCGTTTTGGACTGGATCTGTTGTGTGCATTAGGTGAAGGCGCAGGGTTTTTTATCGTCCAAGCCAATAATCCATTGTTGCGCGTCCGAGTAGACAACACTGGCATTCCATTTAATGTTTCGAATTACACTGATGCCCAACTCGTGAGTATAGTTGAGAACAATTATATTTTACGTCTGGAATCAATGGTAAATGCCCCAGAATTTGATGTTCATCCAGGTAATTATCCCGGGACAGTTTTGTATAGCACAGGCAAAAAAGATTATTCAGCAGTTACTGCTCAATGGCCTGATTTAGTTCAAGTTTTACCTTCTATACAGAACGTCGGAAGTGCGGTGTTCAACATAAAAAATTGCGGTCGAGATTTTATGCTGACAAACACCGGGGCTGGGTTAGGGCATTTTCATTCTGTTTGGTCACAAAATAACAGACTCCCCGGTTACATATCGAACTGCTATGATTTAACGATGACATATGAAGATTATGTACCGCACAATGAAACATCTGGTGGGTTGATATTTAGTGAATGTGGTACTCTTTCATTAGAAAATATTTTGATTGGTGCAGGTGGGATAGGACATTTGTGTATATGGGATTGCCGTAACGTCCATATGAACCGTCATATTTCTATATGTGGTAATACCACTTGGGCTGCATCTAACCAAGTAGATGATCTTTATGCTTTAGAAATTTGTAACTCTGAAGTTCATATGAGCGGTGTACATGCCCAAAACTCTGGTAAATTTGCTCGGGTTGGGTTTAACTCACAATTAACTGTGGACCATCTTACTGCATGGGATGTTTCAAAATTATTCTTGATGACTAATGATTTGACTAAATTGAAATATCGTGGCCAGCGCAAGGACGTTACAGGAGATCCGAGTCGTATTTTTGTAACTTCAGGATTCGCTCAAAACCTTAATGCGTCTCAATTTGGTTGGGCCTGCACGCCAGTTATAGAAATAGACAGTACTGTTAATGGCGATTTCAAATTATATTGGAACTGTTGGACAAACAACGTTCACGCGGGATATGGGTCTGAATCTGAAGCAAATCTTGCTATCGTCAGTGTGGCTTCTACAAGTTCTACTGGTACGGTATCATTCGGCGAGGACGCTAAATTGGAAGGTAATACGACGAACTATGTTCTTCGTCTCGCGAACAAAAACCAATTAGGGAAAGTTCGCACTCGTCAAACTTCCTTCTGTCGTGTGCGTTATACCAATGACAACTCTCAGTCGTCCTTTGCCATGCGCGAAGCTGCTCACGACAATGGTACTACTGTGATTCCTATTGATGGGACGACATATAGCTATCCGTACCGCAGACCTGCTAAATATTTCGTATCTTTGAACGTCCCTGCTGGAGGTGGTTCCTGTTCAGTGACATTAAATGGTATGACGATTTTCCAAACTACGGTGGTTGGCACACATGGTATAGTTATTGAGATGAAATACCAAGAAACGGTCGTATTTACGTCATCCAACGTTACTGTATCAAATGCGCAGTGGCGTTATATTTTGGAGGAATAA
Tertiary structure
PDB ID
1ccca9157101b715513f9dbec669bbe0eb519e3d78ca5ac0775aa5eef1dd5662
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50