Protein

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Genbank accession
XRM23490.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSYITPQSKTSIEINNRIAAVNHDEQTADIKALLDKVDLEPSPDLTYTGNPAGPTDVPVPVNKAGNFSLWFDALIQPIMNLISKQSKATGILDSSGKTQQQINDAVLGVTYYAALEGFVPDDISKATANSLAWVNLQNKMVNGDSVVFDLGTFYFNDPINITKIINIEGREKQHTLFKFNNPTNGIIRNVRGGRLSNFTVTGTKTAVTLDPKNKIFGTIGLYDKYDEAASAAGYIDTYNVVSTGFDCGRVNATEGSSTWNGAYRETRDCWFRNNRIGLVFLNGSTDDKYYGGIVSANTEIGIWSYSTTAMYNNCKFIGTTIEGNGIYDQSLGYNSSTPSKCNIYVGGVASVYLIGSYNEKALNFIEEGGQLYKIGCHNHSNAIDLTKNGYVFYSGINWGKLTLVPYFNTLGSILYPFTGITNPAVQSTTAKTVKFRSTVNNGVGYAVRSRLITLPSGILADSIGGEYFRLKYKINSGYTANAGLKPVVEIYFYAKDGSYMGLRTGIWSNYQTQSGNGQVADISAIAPSSVSTTAGAWSINKGQELSHILVSIAFKKGDNSNPDFSSDNLDIDIFDMSVGFFAKNEYNLTPFRHDTGTTEQRPLLQSTDINYRYLDTTLNRTVIWNGTAWVNEFIQADLTAGLTAGTSTTANLSAIANAINTTGKRTGLTVLNTTNNKFYMAVGGAAGDNWISTDGSSTLTPV
Physico‐chemical
properties
protein length:702 AA
molecular weight: 76237,24140 Da
isoelectric point:5,96857
aromaticity:0,10826
hydropathy:-0,22208

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XRM23490.1
1 702
Domain Start End Length (AA) Confidence
N-terminal 1 128 128 0,9884
Central domain 129 401 274 0,9917
C-terminal 402 702 300 0,8494
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-128
Central
129-401
C-terminal
402-702

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage vB_AbaM_3098
[NCBI] 		3402122 No lineage information
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRM23490.1 [NCBI]
Genbank nucleotide accession
PV081573.1 [NCBI]
CDS location
range 33451 -> 35559
strand +
CDS
ATGTCATACATTACACCGCAATCGAAGACTTCAATTGAAATTAATAATCGTATTGCTGCAGTAAACCATGATGAGCAAACTGCTGATATCAAAGCACTATTAGACAAAGTAGATTTAGAGCCATCTCCTGATCTAACCTATACTGGAAATCCTGCAGGTCCTACAGATGTACCAGTACCCGTTAATAAAGCTGGCAATTTTTCTTTGTGGTTTGATGCACTAATCCAGCCTATTATGAATTTAATTTCCAAGCAAAGTAAAGCAACTGGTATTTTAGACTCATCTGGCAAAACTCAGCAACAAATTAATGATGCTGTTCTAGGCGTCACTTACTACGCAGCCTTAGAAGGCTTCGTTCCAGATGACATTTCCAAAGCTACAGCGAATTCCCTAGCTTGGGTTAATTTGCAAAATAAAATGGTAAATGGAGATAGTGTCGTATTTGATTTGGGTACTTTTTATTTTAACGATCCTATTAACATTACTAAAATTATTAATATTGAAGGCAGAGAAAAACAGCACACTTTGTTTAAATTTAATAACCCTACTAATGGCATTATAAGAAATGTACGAGGTGGTAGGCTATCTAATTTTACAGTAACTGGAACTAAAACTGCAGTTACACTTGATCCTAAAAACAAAATATTTGGCACCATTGGATTATACGACAAATATGATGAAGCAGCGTCAGCTGCTGGTTACATTGACACTTATAATGTAGTGTCAACTGGGTTCGACTGTGGTCGAGTAAATGCAACAGAAGGCAGTTCAACTTGGAATGGAGCTTACCGAGAAACTAGAGATTGCTGGTTCCGAAATAACCGTATAGGTTTGGTTTTCCTTAATGGAAGCACAGATGACAAATATTACGGTGGTATTGTAAGCGCAAATACAGAAATTGGAATCTGGTCTTACTCTACTACTGCGATGTATAATAACTGTAAATTTATAGGGACTACTATTGAAGGTAATGGAATTTATGACCAATCTTTAGGTTATAATTCTTCAACTCCTTCTAAATGCAATATCTATGTTGGCGGAGTTGCATCTGTTTATCTAATTGGAAGCTACAATGAAAAAGCTCTAAATTTTATTGAAGAAGGCGGTCAATTATATAAAATAGGATGTCACAATCACAGTAACGCTATTGATTTAACTAAGAATGGATATGTATTTTATTCTGGAATTAACTGGGGTAAATTAACTTTAGTTCCGTATTTCAATACTCTGGGCTCTATTTTATATCCTTTCACAGGAATCACTAACCCAGCAGTTCAATCTACTACGGCTAAAACTGTTAAATTTAGATCTACAGTTAACAACGGTGTTGGATATGCAGTTCGTTCTAGATTAATTACATTGCCGTCTGGTATTTTAGCTGATTCTATTGGCGGTGAATATTTCAGATTAAAATATAAAATTAATTCTGGATACACAGCAAATGCTGGATTAAAGCCTGTCGTTGAAATTTATTTCTACGCTAAAGATGGCAGTTACATGGGTCTTAGAACAGGTATCTGGTCAAATTACCAAACTCAATCTGGTAATGGCCAAGTTGCCGACATCAGCGCAATAGCTCCTTCTAGTGTATCTACAACTGCAGGTGCGTGGTCTATTAACAAAGGTCAGGAATTAAGTCATATTCTAGTGTCAATAGCATTCAAGAAGGGAGATAACTCTAATCCAGATTTTAGTTCAGATAATTTAGATATAGATATTTTCGACATGTCAGTTGGTTTCTTCGCTAAAAATGAATATAACCTTACTCCTTTCAGACATGATACAGGTACAACTGAACAAAGACCTTTATTACAGTCTACTGACATTAACTACAGATATTTAGATACTACTCTAAATAGGACTGTTATTTGGAATGGAACTGCATGGGTTAATGAATTTATCCAAGCTGATTTAACTGCAGGATTAACAGCTGGAACTTCAACTACTGCTAACTTATCTGCGATAGCCAATGCTATTAACACTACAGGTAAGCGGACAGGTTTAACAGTTCTGAATACAACCAACAATAAATTTTATATGGCTGTAGGTGGAGCTGCAGGGGACAACTGGATTTCAACAGATGGAAGTTCAACTCTAACCCCAGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6bdb8e9bfc8d195108509bc13be3c999e2aae8157e8c633e0d24f9ff98b2640b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6606
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Rational in vitro design of a two-phage cocktail against a contemporary A. baumannii strain recovered from a burned patient at CHUV de Villiers de la Noue,H., Golliard,G., Vuattoux,X. and Resch,G. 2025-10-29 — GenBank