Protein

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Genbank accession
AGH57703.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect2
Probability 0,50
TF
Evidence Phold
Probability 1,00
Protein sequence
MALTQVKSDGIVDGAVTTNKLSDSGVTAGTYGSSSAIPAITVDAKGRVTSASTSSIDSTAITNGTSNVSVAASGNITATRAGTQRLAVTSSGIDVTGTVQASGNLNPDTTNTYDLGTSSKQWRNVYADTLYGDGSNITGIDAQPNGGGSDNIFFETGQTITTSYTIPSNTNAATIGNLSINSGVVVTVSSGSVWIALG
Physico‐chemical
properties
protein length:198 AA
molecular weight: 19728,16290 Da
isoelectric point:4,30745
aromaticity:0,04545
hydropathy:-0,05051

Domains

Domains [InterPro]
IPR044914
54–138
IPR044914
AGH57703.1
1 198
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage KBS-P-1A
[NCBI] 		889951 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGH57703.1 [NCBI]
Genbank nucleotide accession
HQ634188 [NCBI]
CDS location
range 15264 -> 15860
strand +
CDS
ATGGCACTAACACAAGTAAAATCTGACGGCATCGTTGATGGTGCCGTCACCACAAATAAGCTATCTGATTCAGGTGTAACCGCCGGAACCTATGGCAGCTCGTCTGCTATTCCGGCGATCACTGTTGATGCCAAGGGCAGGGTTACTTCTGCCTCAACCAGCTCCATCGACAGCACTGCTATTACCAACGGCACGTCCAACGTGTCGGTGGCAGCTAGCGGGAACATTACGGCTACTCGTGCTGGCACTCAGCGGCTGGCTGTTACCTCCTCCGGCATCGACGTAACCGGCACGGTTCAAGCAAGCGGAAACCTTAATCCTGATACAACCAACACCTACGATTTAGGCACTTCAAGTAAGCAGTGGCGCAACGTCTACGCTGACACCCTGTACGGCGACGGTTCAAACATAACGGGTATTGATGCCCAACCTAATGGTGGGGGTTCTGACAACATCTTCTTTGAGACGGGTCAAACTATCACTACCAGTTATACCATTCCTAGCAATACTAACGCTGCTACAATTGGTAATTTAAGTATAAACAGTGGCGTTGTTGTTACTGTTTCTTCCGGCTCTGTCTGGATTGCGTTGGGTTAA

Tertiary structure

PDB ID
2e391e024fadfaa910705f4a8571df32c816d1abadddee22addb27cf821ccad3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7484
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage KBS-P-1A Henn,M.R., Lennon,J., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank