Protein

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Genbank accession
YP_010652894.1 [GenBank]
Protein name
minor tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MVLPAPRFRTTRKWAANNVQPDNSLVVEGAATTNVNLTVGAGAAIIVFVAGNVTSAARVDGVAMTLVGKTSNGAMYGITGLAAGARNVQVDRSGSSAHIVAVLSYTGVSTITGGALGSGSGNTPSGTPSGSGHLAVVGFDFGVSSGDVGSVVSNGNLRQLYRRTAANALAVADKDTVPVTITNPTGGSWTSIGVWLST
Physico‐chemical
properties
protein length:198 AA
molecular weight: 19660,81140 Da
isoelectric point:9,97592
aromaticity:0,05051
hydropathy:0,25303

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010652894.1
1 198
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0387
Central domain 11 187 178 0,0012
C-terminal 188 198 10 0,9987
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-187
C-terminal
188-198

Taxonomy

  Name Taxonomy ID Lineage
Phage Gordonia phage Herod
[NCBI] 		2776861 Uroviricota > Caudoviricetes > Nymbaxtervirinae > Nymphadoravirus herod >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010652894.1 [NCBI]
Genbank nucleotide accession
NC_070791 [NCBI]
CDS location
range 27051 -> 27647
strand +
CDS
GTGGTTCTCCCTGCGCCGCGGTTCCGCACCACCCGTAAGTGGGCGGCGAACAACGTCCAACCCGACAACTCGCTGGTGGTCGAGGGGGCGGCGACGACCAACGTCAACCTGACCGTCGGTGCGGGCGCGGCGATCATCGTGTTCGTCGCGGGCAATGTCACGAGCGCCGCCCGGGTCGACGGTGTCGCGATGACCCTCGTCGGCAAGACCAGCAACGGCGCCATGTACGGCATCACCGGACTCGCCGCCGGCGCCCGCAACGTGCAGGTCGACCGGTCGGGTTCGAGCGCCCATATAGTGGCCGTGCTCTCGTACACCGGGGTCTCGACGATCACGGGCGGGGCGCTCGGCAGCGGGTCGGGAAACACCCCTTCAGGCACGCCGTCGGGGTCGGGTCACCTCGCAGTCGTTGGATTCGACTTCGGCGTCTCCTCCGGCGACGTCGGGTCAGTCGTCTCGAACGGCAACCTCCGCCAGCTCTATCGCCGCACCGCAGCCAACGCGCTCGCCGTCGCCGACAAGGACACCGTGCCGGTCACCATCACCAACCCCACCGGTGGCAGCTGGACGAGCATAGGGGTGTGGTTGAGCACGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c0b48fad4306487b2c10ff3cb75be5e2cbec3c311c41ac7474f30bebf9842179
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8807
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50