Protein

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Genbank accession
YP_010652894.1 [GenBank]
Protein name
minor tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,39
Protein sequence
MVLPAPRFRTTRKWAANNVQPDNSLVVEGAATTNVNLTVGAGAAIIVFVAGNVTSAARVDGVAMTLVGKTSNGAMYGITGLAAGARNVQVDRSGSSAHIVAVLSYTGVSTITGGALGSGSGNTPSGTPSGSGHLAVVGFDFGVSSGDVGSVVSNGNLRQLYRRTAANALAVADKDTVPVTITNPTGGSWTSIGVWLST
Physico‐chemical
properties
protein length:198 AA
molecular weight: 19660,81140 Da
isoelectric point:9,97592
aromaticity:0,05051
hydropathy:0,25303

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YP_010652894.1
1 198 aa
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0387
Central domain 11 187 178 0,0012
C-terminal 188 198 10 0,9987
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Gordonia phage Herod [NCBI] · taxon 2776861
Uroviricota Caudoviricetes Nymbaxtervirinae Nymphadoravirus herod
Host No host information

Coding sequence (CDS)

Genbank protein accession
YP_010652894.1 [NCBI]
Genbank nucleotide accession
NC_070791 [NCBI]
CDS location
range 27051 -> 27647
strand +
CDS
GTGGTTCTCCCTGCGCCGCGGTTCCGCACCACCCGTAAGTGGGCGGCGAACAACGTCCAACCCGACAACTCGCTGGTGGTCGAGGGGGCGGCGACGACCAACGTCAACCTGACCGTCGGTGCGGGCGCGGCGATCATCGTGTTCGTCGCGGGCAATGTCACGAGCGCCGCCCGGGTCGACGGTGTCGCGATGACCCTCGTCGGCAAGACCAGCAACGGCGCCATGTACGGCATCACCGGACTCGCCGCCGGCGCCCGCAACGTGCAGGTCGACCGGTCGGGTTCGAGCGCCCATATAGTGGCCGTGCTCTCGTACACCGGGGTCTCGACGATCACGGGCGGGGCGCTCGGCAGCGGGTCGGGAAACACCCCTTCAGGCACGCCGTCGGGGTCGGGTCACCTCGCAGTCGTTGGATTCGACTTCGGCGTCTCCTCCGGCGACGTCGGGTCAGTCGTCTCGAACGGCAACCTCCGCCAGCTCTATCGCCGCACCGCAGCCAACGCGCTCGCCGTCGCCGACAAGGACACCGTGCCGGTCACCATCACCAACCCCACCGGTGGCAGCTGGACGAGCATAGGGGTGTGGTTGAGCACGTGA

Genome Context

Tertiary structure

YP_010652894.1
ESMFold structure
Source ESMFold
pLDDT 88.1
Oligomeric state monomer
Download structure