Protein

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Genbank accession
AIX43047.1 [GenBank]
Protein name
tail collar domain protein
RBP type
TF
Evidence RBPdetect2
Probability 0,93
Seq2Symm
C3 confidence 0,280
C3 0,280
C2 0,025
C1 0,007
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MSQINFPNSPSDGEEFLASNGTTYRYDSSTGQWKILSGPGVQGPAGNTGPTGSIIMWGTSTLPEGYIECNGQSTSGYTALAALYGSNVPDLRGEFVRGWDNGKGTDSGRALLGSQGESFKSHTHTLRIHTITVRMHTITHRIPTNTRNNWVELFHLTFCNPGAIGLVTQILHQLVIPQQPINLLQQPIMQPQQPTKAQVILKPVHATYL
Physico‐chemical
properties
protein length:209 AA
molecular weight: 22766,38380 Da
isoelectric point:7,87470
aromaticity:0,07656
hydropathy:-0,34019

Taxonomy

Phage
Synechococcus phage ACG-2014f [NCBI] · taxon 1493511
Uroviricota Caudoviricetes Pantevenvirales Kyanoviridae Atlauavirus Atlauavirus tusconc8
Host
Synechococcus sp. WH 7803 [NCBI] · taxon 32051
Cyanobacteriota Cyanophyceae Synechococcales Synechococcaceae Synechococcus Synechococcus sp. WH 7803

Coding sequence (CDS)

Genbank protein accession
AIX43047.1 [NCBI]
Genbank nucleotide accession
KJ019148 [NCBI]
CDS location
range 204472 -> 205101
strand +
CDS
ATGTCTCAAATTAATTTCCCAAATAGCCCATCCGATGGTGAAGAGTTTCTAGCATCTAATGGAACTACGTATCGATACGATAGTTCTACGGGTCAGTGGAAGATTCTATCAGGTCCTGGTGTTCAGGGACCCGCTGGTAATACAGGTCCTACTGGATCTATTATTATGTGGGGAACTTCAACACTACCAGAGGGATATATCGAATGTAATGGTCAATCTACTTCTGGATATACAGCTTTAGCTGCGTTATATGGTTCCAATGTCCCAGATCTTCGTGGTGAGTTTGTAAGGGGTTGGGATAACGGTAAGGGTACTGATAGTGGTCGGGCTCTATTGGGTAGTCAAGGTGAATCGTTTAAAAGCCACACACACACACTCAGAATTCACACAATCACAGTCAGAATGCACACAATCACACACAGAATCCCCACAAACACACGCAACAACTGGGTGGAACTATTTCATCTGACCTTTTGCAATCCGGGAGCTATCGGATTGGTAACGCAAATTCTGCATCAGTTAGTAATACCACAGCAACCAATAAATCTACTACAGCAACCAATAATGCAGCCACAGCAACCAACCAAAGCACAGGTGATACTGAAACCCGTCCACGCAACATATCTTTGA

Genome Context

Tertiary structure

AIX43047.1
ESMFold2 structure
Source ESMFold2
pLDDT 78.0
Oligomeric state monomer
Download structure