Protein

View in Explore
Genbank accession
WGG14611.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,74
Protein sequence
MKKILDSARNYLKNNSRIKTASLISLELPGSTGTSTAFIYLTDYFRDVLYNGILYQAGKVKSISTHKQNRDLSIGSLSFTITGTAQDEVLKLVQNGVSFLDRLVSIHQAIITEDGSILPVDPDTNGPLLYFRGRITGGGIKDNISTSGVGTSTITWNCSNQFYDFDRVNGRFTDDASHRGLEVVAGQLVPSNGAKRLEYQEDYGFFHANKSISILAKYQVQEERYKLKSKKKLFGLSRSYSLKKYYETVTKEVDIDFNLAAKYIPVVYGVQKIPGIPIFADTELHNPNIVYVVYAFAEGEIDGFLDFSFGDNPMICMDSNDSSARTCFGVKKVAGDTMQRIASGVSSSSPSVHGQEYKYNDGNGDIRIWTYHGKADQTASEVLVNIAKERGFYLQNMNGNGPEYWDARYKLLDTAYAVVRFTINENRTEIPEVSAEIQGKKIKIYHSDGRVTANSTSLNGIWQTLDYLTSDRYGANITIDQFPLQQLIQEAAILDIIDESYQVSWQPYWRYVGWTDPLAENRQIVQMNTILDTSESVFKNVQGLLESYGGAINNLSGQYRITVEKYSNTPLEINFLDTYGDLELSDTTGRNKFNSVQASIVDPALSWKTNSITFYNSKYKEQDKNLDKKLQLSFANITNYYTARSFADRELKKSRYSRTLSFSLPYQFIGIEPNDAIAFTYDRYGWDKKYFLVDEVENSREGKINVTLQEYGEDVFINSEQVDNSGNDIPDISNNVLPPRDFKYTPTPGGLVGSIGKNGELSWLPSLTNNVVYYSIVHSGHAEPYIVQQLETNPNERMIQEIIGEPAGLAIFEIRAVDINGRRSSPVTLSIELNSAKNLSVVSNFRVTNTASGDVTEFVGPDVKLAWDRIPEEDIIESIFYTLEIRDSQNRMLRSVRIENQYTYDYLLIYNKADFALHNSGALGINRKLYFRIRAEGDDGEQSVEWASI
Physico‐chemical
properties
protein length:949 AA
molecular weight: 107015,37560 Da
isoelectric point:5,23273
aromaticity:0,11170
hydropathy:-0,40548

Domains

Domains [InterPro]
DC_0187
STR
228–947
DC_0187
IPR032876
ATT
595–696
IPR032876
WGG14611.1
1 949
Architecture
STR
ATT
STR
STR 228-594 | ATT 595-696 | STR 697-947 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WGG14611.1
1 949
Domain Start End Length (AA) Confidence
N-terminal 1 312 312 0,9297
Central domain 313 526 215 0,4133
C-terminal 527 949 422 0,0037
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-312
Central
313-526
C-terminal
527-949

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage phC11
[NCBI] 		3038309 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica
[NCBI] 		59201 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WGG14611.1 [NCBI]
Genbank nucleotide accession
OQ680480.1 [NCBI]
CDS location
range 101030 -> 103879
strand +
CDS
ATGAAAAAAATATTAGATAGTGCTAGAAACTACTTAAAAAATAATAGCAGAATAAAAACTGCTAGTCTAATTTCTCTAGAATTACCCGGCTCTACTGGTACTAGTACTGCTTTTATTTACTTAACTGACTATTTTAGAGATGTACTATATAACGGTATTCTGTACCAGGCCGGTAAAGTTAAGTCTATTAGCACACATAAACAAAATAGAGATTTATCTATTGGCAGTCTATCTTTTACTATTACAGGTACAGCGCAGGATGAAGTACTGAAATTAGTGCAGAATGGTGTGTCCTTTTTAGATAGACTAGTATCAATTCATCAAGCAATTATTACAGAGGATGGTTCTATTTTACCTGTAGACCCAGACACAAATGGCCCTTTATTATATTTTAGAGGGAGAATTACCGGCGGGGGTATTAAGGACAACATTAGTACTTCTGGGGTTGGAACCTCTACAATTACTTGGAATTGTTCTAACCAATTCTATGATTTTGATAGGGTTAATGGTAGATTTACTGATGATGCTTCTCATAGGGGGCTTGAGGTTGTAGCAGGGCAATTAGTTCCATCTAACGGGGCTAAAAGACTTGAGTACCAAGAAGATTATGGGTTCTTTCACGCTAATAAAAGTATCTCTATTCTAGCAAAGTATCAGGTACAGGAAGAAAGATACAAGCTAAAGTCTAAGAAAAAGCTATTTGGCCTATCTAGAAGCTATAGTCTTAAAAAGTATTATGAGACTGTTACTAAAGAAGTAGATATAGATTTTAACCTTGCTGCTAAGTATATACCAGTAGTTTATGGTGTACAGAAAATACCGGGAATACCTATTTTTGCGGATACAGAATTACACAATCCTAATATAGTTTATGTAGTATATGCTTTTGCTGAAGGAGAGATAGACGGTTTTCTTGACTTTTCCTTCGGGGATAACCCTATGATTTGTATGGACTCTAATGATAGCTCTGCTAGAACCTGTTTCGGTGTTAAAAAAGTAGCCGGAGACACCATGCAAAGAATAGCATCAGGAGTATCTTCTAGTAGTCCTTCTGTGCATGGTCAGGAATATAAGTATAATGATGGTAATGGTGATATAAGGATTTGGACTTATCATGGAAAAGCAGATCAAACGGCTTCTGAAGTATTAGTAAATATAGCGAAGGAACGTGGATTCTATCTTCAAAATATGAACGGTAATGGGCCTGAGTACTGGGATGCTAGATATAAACTATTAGATACTGCATACGCGGTAGTACGCTTTACTATTAATGAAAATAGAACTGAGATCCCCGAAGTTAGTGCTGAGATTCAGGGTAAGAAGATAAAAATCTATCATTCTGATGGTAGAGTAACTGCTAATAGCACTAGTTTAAATGGTATCTGGCAAACACTTGATTACTTAACTTCAGATAGATACGGAGCTAACATTACTATTGATCAGTTCCCTCTTCAACAATTGATACAGGAAGCTGCTATCCTAGATATTATAGATGAATCTTACCAAGTATCCTGGCAGCCATACTGGAGATACGTTGGGTGGACGGATCCATTAGCAGAAAATAGACAAATAGTACAAATGAATACTATTCTAGATACATCTGAATCAGTATTTAAAAACGTGCAAGGTTTGTTAGAGTCCTACGGTGGGGCTATTAACAACTTATCTGGCCAATATAGGATTACTGTAGAAAAATATTCTAATACTCCATTAGAGATTAATTTTCTGGATACTTATGGTGATTTAGAGCTATCAGATACTACTGGTAGAAATAAATTCAACTCAGTTCAAGCATCCATCGTAGACCCAGCCCTTAGCTGGAAAACTAACTCTATTACCTTTTACAACTCTAAATATAAAGAACAAGATAAAAATTTAGACAAAAAATTACAATTATCTTTTGCAAATATAACTAACTACTATACTGCTAGAAGTTTTGCAGACAGAGAACTTAAGAAATCTAGGTATTCTAGAACCCTCTCATTTTCTTTACCATATCAATTCATTGGTATTGAGCCTAACGACGCTATTGCATTTACATACGACCGTTACGGATGGGATAAGAAGTACTTTTTAGTAGATGAAGTAGAAAACTCTAGAGAAGGGAAGATAAATGTCACCCTACAGGAATATGGAGAAGATGTATTCATCAACTCTGAGCAGGTTGATAATAGTGGTAATGATATACCAGATATTAGTAACAACGTTCTTCCTCCTAGAGATTTTAAATATACCCCTACACCTGGTGGTTTAGTTGGTTCTATAGGAAAAAATGGTGAGTTATCTTGGCTTCCAAGCTTAACTAATAACGTAGTTTATTACTCTATCGTGCATTCCGGTCATGCTGAACCTTATATAGTGCAGCAACTAGAAACAAATCCCAATGAACGCATGATCCAAGAGATAATTGGAGAGCCTGCAGGTTTAGCAATATTTGAAATAAGGGCAGTAGATATTAATGGTAGAAGAAGTTCTCCAGTAACATTATCTATAGAACTTAACTCTGCTAAAAACCTAAGCGTAGTATCTAATTTTAGAGTAACTAATACTGCCTCTGGAGATGTAACTGAGTTTGTTGGCCCAGATGTGAAATTAGCCTGGGATAGAATACCTGAAGAAGATATAATAGAGAGTATATTTTATACCCTTGAAATACGTGATTCACAGAATAGAATGTTAAGAAGTGTACGTATTGAAAATCAGTATACTTATGACTATTTATTAATATATAATAAGGCAGATTTTGCTCTTCACAACAGTGGTGCTCTAGGTATAAATAGAAAATTGTATTTTCGTATTAGGGCCGAAGGGGATGATGGAGAACAGTCTGTGGAGTGGGCATCCATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5eb8f66718c8522e1a92e39c2aac6ddfb5e4343fedc01fa238e2e9cab77ca554
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8140
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Comparative analysis of effectiveness for phage cocktail development against multiple Salmonella serovars and its biofilm control activity Ribeiro,J.M., Pereira,G.N., Durli,I., Teixeira,G.M., Bertozzi,M.M., Verri,W.A., Kobayashi,R.K.T. and Nakazato,G. — — GenBank