Protein

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Genbank accession
BAO09277.1 [GenBank]
Protein name
putative structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAFNYTPLTETQKLKDMYPKVNDIGNFLKTEVNLSDLKVVTSVDFNNILDKIPDSGNYYVTTSKNQPSGENWNGFVRLDKRNVNYYKIYYSPYSSNKMYIKTYANGTVYDWISFKLDEGNLYNEGNTLNVKELTESTTQYATLVNPPKENLNTGWVNYKESKNGVSSLVEFNPVNSTSTFKMIRKLPVQEQKPNLLKDSLFVYPETSYSNIKTDNWDTPPFWGYSSNSGRSGVRFRGENTVQIDDGSNTYPSVVSNRFKMGKELSVGDTVTVSVYAKINDPALLKDNLVYFELAGYDTVDDTSKNPYTGGRREITASEITTEWKKYSFTFTIPENTIGASGVKVNYVSLLLRMNCSSSKGNGAVVYYALPKLEKSSKVTPFITHENDVRKYDEIWSNWQEVISKDELKGHSPVDIEYNDYFKYQWWKSEVNEKSLKDLAMTVPQGYHTFYCQGSIAGTPKRRSIRGTIQVDYDKGDPYRANKFVKLLFTDTEGIPYTLYYGGYNQGWKLLKQSETSTLLWEGTLDFGSTEAVNLNDSLDNYDLIEVTYWTRSAGHFSTKRLDIKNTSNLLYIRDFNISNDSTGSSVDFFEGYCTFPTRTSVQPGMVKSITLDGSTNTTKVASWNEKERIKVYNIMGINRG
Physico‐chemical
properties
protein length:640 AA
molecular weight: 72977,59960 Da
isoelectric point:6,53071
aromaticity:0,12969
hydropathy:-0,62422

Domains

Domains [InterPro]
DC_0568
STR
11–409
DC_0568
cd19958
STR
41–111
cd19958 G3DSA:2.60.120.260 DC_0448
IPR003305
CBM
228–337
IPR003305
BAO09277.1
1 640
Architecture
STR
STR 11-639 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
BAO09277.1
1 640
Domain Start End Length (AA) Confidence
N-terminal 1 294 294 0,5997
Central domain 295 505 212 0,2017
C-terminal 506 640 134 0,9667
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-294
Central
295-505
C-terminal
506-640

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage S25-3
[NCBI] 		1041526 Uroviricota > Caudoviricetes > Herelleviridae > Kayvirus > Kayvirus S253
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BAO09277.1 [NCBI]
Genbank nucleotide accession
AB853330 [NCBI]
CDS location
range 81230 -> 83152
strand +
CDS
ATGGCATTTAACTACACGCCTCTTACTGAAACACAGAAGTTAAAAGATATGTATCCTAAAGTTAATGATATAGGTAATTTTTTAAAAACAGAGGTTAATCTTAGTGATTTAAAAGTAGTAACTAGTGTTGATTTTAATAATATTCTAGACAAGATTCCTGATAGTGGTAACTATTATGTTACAACTTCTAAAAACCAACCATCAGGAGAAAATTGGAATGGTTTTGTAAGATTGGATAAACGAAATGTAAATTATTATAAAATTTACTATTCACCATATAGCAGTAATAAAATGTATATAAAGACTTATGCTAATGGAACAGTATATGATTGGATTAGTTTTAAATTAGATGAAGGTAACTTATACAATGAAGGTAATACTTTGAATGTAAAGGAACTTACTGAATCCACAACTCAATATGCAACACTAGTTAATCCTCCAAAAGAGAACTTAAATACAGGTTGGGTTAATTACAAAGAAAGTAAAAATGGTGTTTCTTCTTTAGTAGAATTTAACCCGGTTAACTCCACTTCAACTTTTAAGATGATAAGAAAGTTACCAGTACAAGAACAAAAGCCTAACTTATTGAAAGATAGTTTATTTGTTTATCCTGAAACTAGCTATTCTAATATTAAAACAGATAACTGGGATACGCCTCCATTTTGGGGATATTCTTCTAATAGTGGTCGTTCAGGAGTTAGATTTAGAGGAGAGAATACAGTACAGATAGATGATGGGTCTAATACGTACCCTTCAGTAGTTTCTAATAGGTTTAAAATGGGTAAAGAGCTTTCTGTAGGTGATACTGTAACGGTATCAGTATATGCTAAAATTAATGACCCTGCTTTACTTAAAGATAACTTAGTTTACTTTGAATTAGCAGGATACGATACTGTAGATGATACTAGTAAAAATCCTTATACAGGAGGACGTAGAGAAATAACAGCAAGTGAGATAACAACTGAGTGGAAAAAATACTCTTTCACATTCACGATACCTGAAAATACAATCGGAGCATCAGGCGTTAAAGTTAATTACGTATCTTTACTACTAAGAATGAATTGTTCATCTAGTAAAGGTAATGGTGCTGTAGTATACTATGCCTTACCTAAATTAGAAAAATCATCTAAAGTTACACCATTTATTACACATGAAAATGATGTTCGTAAATATGATGAGATTTGGTCTAATTGGCAAGAAGTTATTAGTAAAGATGAATTAAAAGGTCACTCTCCTGTAGATATTGAATATAATGATTATTTTAAATATCAGTGGTGGAAATCTGAAGTTAATGAAAAGAGTTTAAAAGATTTAGCTATGACAGTACCTCAAGGATATCATACATTTTATTGTCAAGGCTCTATTGCCGGGACGCCTAAGAGACGTTCTATTAGAGGAACCATTCAGGTAGATTATGACAAAGGTGACCCATATAGAGCTAATAAGTTTGTTAAATTATTGTTTACTGACACAGAGGGTATTCCTTACACATTATATTATGGTGGTTATAATCAGGGTTGGAAACTCTTAAAGCAATCAGAAACTTCTACTTTACTATGGGAAGGTACTTTAGATTTTGGGTCTACGGAAGCTGTTAACTTAAATGACTCATTAGATAATTATGATTTAATTGAGGTAACTTATTGGACTCGTTCAGCAGGACATTTTTCTACAAAAAGATTAGATATAAAAAATACATCAAATTTACTGTATATTAGAGATTTTAATATTTCAAATGATAGTACAGGTTCTAGTGTAGACTTTTTTGAAGGGTATTGCACTTTTCCTACTAGAACATCAGTACAACCTGGTATGGTAAAATCTATAACTTTAGACGGGTCTACAAATACAACAAAAGTAGCATCATGGAATGAAAAGGAACGTATAAAGGTATACAATATTATGGGAATTAATAGAGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d73e0210513a5964008c54a9fb86535328d19cb724135dad2c9aec2e40f4f52e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6971
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Evaluating efficacy of bacteriophage therapy against Staphylococcus aureus infections using a silkworm larval infection model Takemura-Uchiyama,I., Uchiyama,J., Kato,S., Inoue,T., Ujihara,T., Ohara,N., Daibata,M. and Matsuzaki,S. 2013 23869440 GenBank
Genomic and phylogenetic traits of Staphylococcus phages S25-3 and S25-4 (family Myoviridae, genus Twort-like viruses) Takemura-Uchiyama,I., Uchiyama,J., Kato,S., Ujihara,T., Daibata,M. and Matsuzaki,S. 2014 — GenBank